RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 NAP1L3Q99457 506 aaPredicted RBP13.72□□□□□ -0.21
SGCA-201ENST00000262018 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 B3GNT5Q9BYG0 378 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 SPHK2Q9NRA0 654 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 FAM49BQ9NUQ9 324 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 USP36Q9P275 1121 aaKnown RBP13.72□□□□□ -0.21
SGCA-201ENST00000262018 HESX1Q9UBX0 185 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 SH3BP1Q9Y3L3 701 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 PRRT4C9JH25 899 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 CCDC188H7C350 402 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 PSTPIP1O43586 416 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 ERLIN1O75477 346 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 KRT3P12035 628 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 CCDC130P13994 396 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 RPL34P49207 117 aaKnown RBP13.71□□□□□ -0.22
SGCA-201ENST00000262018 AFF3P51826 1226 aaKnown RBP13.71□□□□□ -0.22
SGCA-201ENST00000262018 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.22
SGCA-201ENST00000262018 IL9RQ01113 521 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 PIGHQ14442 188 aaPredicted RBP13.71□□□□□ -0.22
SGCA-201ENST00000262018 BRD3Q15059 726 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 TEAD4Q15561 434 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 INAVAQ3KP66 663 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 FUT11Q495W5 492 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 WDR93Q6P2C0 686 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 FAM35AQ86V20 835 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 BBS7Q8IWZ6 715 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 FUKQ8N0W3 1084 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 ANKRD52Q8NB46 1076 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 SLC2A14Q8TDB8 520 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 SMARCD1Q96GM5 515 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 ZFRQ96KR1 1074 aaKnown RBP13.71□□□□□ -0.22
SGCA-201ENST00000262018 CEP295NLQ96MC4 621 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 LGMNQ99538 433 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 MED10Q9BTT4 135 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 TTLL2Q9BWV7 592 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 SYNCQ9H7C4 482 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 CYLDQ9NQC7 956 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 ANKRD6Q9Y2G4 727 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 PCDHGA1Q9Y5H4 931 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 SLCO1B1Q9Y6L6 691 aa13.71□□□□□ -0.22
SGCA-201ENST00000262018 COL5A1P20908 1838 aaPredicted RBP13.7□□□□□ -0.22
SGCA-201ENST00000262018 CCDC151A5D8V7 595 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 H0Y8X5 98 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 GOLGA8SH3BPF8 625 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 GFRA2O00451 464 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 TRIM66O15016 1216 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 PCDHGA12O60330 932 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 BRINP1O60477 761 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 FGGP02679 453 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 PYGMP11217 842 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 OXTRP30559 389 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 ACTN2P35609 894 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 CSRP3P50461 194 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 TPMTP51580 245 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 BCAT1P54687 386 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 SNX16P57768 344 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 OGDHQ02218 1023 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 BST2Q10589 180 aaKnown RBP13.7□□□□□ -0.22
SGCA-201ENST00000262018 IFRD2Q12894 506 aaPredicted RBP13.7□□□□□ -0.22
SGCA-201ENST00000262018 TAF10Q12962 218 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
SGCA-201ENST00000262018 STARD3Q14849 445 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 LONRF2Q1L5Z9 754 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 ARHGAP40Q5TG30 622 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 HES3Q5TGS1 186 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 TMEM110Q86TL2 294 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 IGSF8Q969P0 613 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 NAF1Q96HR8 494 aaKnown RBP13.7□□□□□ -0.22
SGCA-201ENST00000262018 LRRC1Q9BTT6 524 aa13.7□□□□□ -0.22
SGCA-201ENST00000262018 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
SGCA-201ENST00000262018 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
SGCA-201ENST00000262018 ATMQ13315 3056 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 E5RJQ4 531 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 CBX4O00257 560 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 TULP2O00295 520 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 CLDN5O00501 218 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 KRIT1O00522 736 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 RFPL3O75679 317 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 FAM200BP0CF97 657 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 KRT10P13645 584 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 ADORA2BP29275 332 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 RFC1P35251 1148 aaPredicted RBP13.69□□□□□ -0.22
SGCA-201ENST00000262018 CLCN6P51797 869 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 TAS2R40P59535 323 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 PDE4CQ08493 712 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 DNAJC3Q13217 504 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 LRRC38Q5VT99 294 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 PMF1Q6P1K2 205 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 LAYNQ6UX15 382 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 PAQR9Q6ZVX9 377 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 PRICKLE2Q7Z3G6 844 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 JOSD2Q8TAC2 188 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 C8orf48Q96LL4 319 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 SLITRK1Q96PX8 696 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms