RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 COL5A1P20908 1838 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 PTPRBP23467 1997 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 CLCN1P35523 988 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 CXCR3P49682 368 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 IRAK1P51617 712 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 RNASE9P60153 205 aaKnown RBP13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 DEUP1Q05D60 604 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 BNIP3Q12983 259 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 DNAJC3Q13217 504 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 COL9A2Q14055 689 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 KRT31Q15323 416 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 POM121L1PQ3SYA9 428 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 C6orf118Q5T5N4 469 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 AGBL4Q5VU57 503 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 C14orf80Q86SX3 495 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 SETD3Q86TU7 594 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 PDZD3Q86UT5 571 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 ATP11CQ8NB49 1132 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 HNRNPLLQ8WVV9 542 aaKnown RBP13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 DYRK4Q9NR20 520 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 PIGVQ9NUD9 493 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 AJAP1Q9UKB5 411 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 HS3ST2Q9Y278 367 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
APOBEC3A-201ENST00000249116 CBX4O00257 560 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 ADCY5O95622 1261 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 SRCP12931 536 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 SCNN1AP37088 669 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 ACADVLP49748 655 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 RAPGEF1Q13905 1077 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 NEK5Q6P3R8 708 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 SPATS2Q86XZ4 545 aaKnown RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 FAM71AQ8IYT1 594 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 MSANTD4Q8NCY6 345 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 NXPE2Q96DL1 559 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 C18orf8Q96DM3 657 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 PGAP3Q96FM1 320 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 KLHDC7BQ96G42 594 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 NYNRINQ9P2P1 1898 aaKnown RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 SMTNL1A8MU46 457 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 KPNA3O00505 521 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 CNTN5O94779 1100 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 PRNPP04156 253 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 TPM2P07951 284 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 PNMA6AP0CW24 399 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 CHRNA3P32297 505 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 CDH5P33151 784 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 RECQLP46063 649 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 GABRB2P47870 512 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 ILKQ13418 452 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 DRAP1Q14919 205 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 IQCB1Q15051 598 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 ALFQ53S48 1182 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 HS1BP3Q53T59 392 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 FAM102AQ5T9C2 384 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 SFMBT2Q5VUG0 894 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 ERICH1Q86X53 443 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 DCAF4L2Q8NA75 395 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 TMIEQ8NEW7 156 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 TSC1Q92574 1164 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 NT5C3BQ969T7 300 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 C1orf74Q96LT6 269 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 PSMB7Q99436 277 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 VPS16Q9H269 839 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 LIMA1Q9UHB6 759 aaKnown RBP13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 VPS51Q9UID3 782 aa13.22□□□□□ -0.29
APOBEC3A-201ENST00000249116 DRGXA6NNA5 263 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 SNAP91O60641 907 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 MT-CO1P00395 513 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 ATP1A3P13637 1013 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 CYP11B1P15538 503 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 CKMT2P17540 419 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 TFE3P19532 575 aaPredicted RBP13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 OR1E1P30953 314 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 SLC25A52Q3SY17 297 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 PIP5KL1Q5T9C9 394 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 OR2A12Q8NGT7 310 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 TBCBQ99426 244 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 CBX8Q9HC52 389 aa13.21□□□□□ -0.3
APOBEC3A-201ENST00000249116 ADAMTS20P59510 1910 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 A0A087WV48 116 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 A0A1W2PQU0 124 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 K7ERQ8 282 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 SLC31A1O15431 190 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 SDC3O75056 442 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 LSM8O95777 96 aaKnown RBP13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 CTSLP07711 333 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 THEGLP0DJG4 465 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 RRM1P23921 792 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 AKT2P31751 481 aa13.2□□□□□ -0.3
APOBEC3A-201ENST00000249116 TAS2R38P59533 333 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms