RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 CDK5RAP1Q96SZ6 601 aaKnown RBP17.84■□□□□ 0.45
HOXC6-201ENST00000243108 DUSP15Q9H1R2 295 aaPredicted RBP17.84■□□□□ 0.45
HOXC6-201ENST00000243108 EPB41L4BQ9H329 900 aa17.84■□□□□ 0.45
HOXC6-201ENST00000243108 SEMA4GQ9NTN9 838 aa17.84■□□□□ 0.45
HOXC6-201ENST00000243108 SFMBT1Q9UHJ3 866 aa17.84■□□□□ 0.45
HOXC6-201ENST00000243108 AGO1Q9UL18 857 aaKnown RBP17.84■□□□□ 0.45
HOXC6-201ENST00000243108 ATP8A1Q9Y2Q0 1164 aa17.84■□□□□ 0.45
HOXC6-201ENST00000243108 NUP205Q92621 2012 aa17.83■□□□□ 0.45
HOXC6-201ENST00000243108 SLC12A8A0AV02 714 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 CST8O60676 142 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 KRT14P02533 472 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 GYS2P54840 703 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 DAOAP59103 153 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 ATP11AP98196 1134 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 CDO1Q16878 200 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 PLK5Q496M5 336 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 EFHC1Q5JVL4 640 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 DENND1CQ8IV53 801 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 BBOF1Q8ND07 529 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 UBLCP1Q8WVY7 318 aaPredicted RBP17.83■□□□□ 0.44
HOXC6-201ENST00000243108 ARL8AQ96BM9 186 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 ACOX2Q99424 681 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 PABPC3Q9H361 631 aaKnown RBP17.83■□□□□ 0.44
HOXC6-201ENST00000243108 FAM204AQ9H8W3 233 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.83■□□□□ 0.44
HOXC6-201ENST00000243108 FBXO10Q9UK96 956 aa17.83■□□□□ 0.44
HOXC6-201ENST00000243108 ZNF487B1APH4 448 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 PMS2P54278 862 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 HDAC4P56524 1084 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 DPYSL3Q14195 570 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 SLMAPQ14BN4 828 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 PDK2Q15119 407 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 TTMPQ5BVD1 217 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 FYB2Q5VWT5 728 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 EGFLAMQ63HQ2 1017 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 GRAMD4Q6IC98 578 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 SIX6OS1Q8N1H7 587 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 SCML4Q8N228 414 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 FRMD1Q8N878 549 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 ZNF513Q8N8E2 541 aaPredicted RBP17.82■□□□□ 0.44
HOXC6-201ENST00000243108 PKNOX2Q96KN3 472 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 ARRDC1-AS1Q9H2J1 176 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 CNGB3Q9NQW8 809 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 CLEC4EQ9ULY5 219 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 ZNF148Q9UQR1 794 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 STARD13Q9Y3M8 1113 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 SPTBN2O15020 2390 aa17.82■□□□□ 0.44
HOXC6-201ENST00000243108 PLXND1Q9Y4D7 1925 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 APOC4-APOC2K7ER74 178 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 LRP3O75074 770 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 PENKP01210 267 aaPredicted RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 APOC2P02655 101 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 NUDT17P0C025 328 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 ADCY8P40145 1251 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 CDH6P55285 790 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 OTUD4Q01804 1114 aaKnown RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 ZNF844Q08AG5 666 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 TRIP13Q15645 432 aaPredicted RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 TRIP4Q15650 581 aaPredicted RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 CSRP2Q16527 193 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 ACTL9Q8TC94 416 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 TSPYL1Q9H0U9 437 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 PSD3Q9NYI0 1048 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 GOLGA6CA6NDK9 693 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 MSI1O43347 362 aaKnown RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 GDF9O60383 454 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 DAB1O75553 588 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 EPN2O95208 641 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 GOLGA6DP0CG33 693 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 BCKDHBP21953 392 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 WASP42768 502 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 ITGA8P53708 1063 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 HSF5Q4G112 596 aaPredicted RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 STRADAQ7RTN6 431 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 GSTA5Q7RTV2 222 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 RFX6Q8HWS3 928 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 MAP7D3Q8IWC1 876 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 FAM217AQ8IXS0 508 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 HAUS1Q96CS2 278 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 XPO6Q96QU8 1125 aaKnown RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 SNRNP25Q9BV90 132 aaKnown RBP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 CALN1Q9BXU9 219 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 ADAM33Q9BZ11 813 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 SMOC1Q9H4F8 434 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 CD248Q9HCU0 757 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 GOLGA6AQ9NYA3 693 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.81■□□□□ 0.44
HOXC6-201ENST00000243108 ZNF510Q9Y2H8 683 aa17.81■□□□□ 0.44
HOXC6-201ENST00000243108 TNRC6BQ9UPQ9 1833 aaKnown RBP17.8■□□□□ 0.44
HOXC6-201ENST00000243108 FYNP06241 537 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 TFE3P19532 575 aaPredicted RBP17.8■□□□□ 0.44
HOXC6-201ENST00000243108 MATKP42679 507 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 DGKGP49619 791 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 EIF3BP55884 814 aaKnown RBP17.8■□□□□ 0.44
HOXC6-201ENST00000243108 DYNLT1P63172 113 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 TFDP2Q14188 446 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 EOGTQ5NDL2 527 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 CEP85LQ5SZL2 805 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 PRR23CQ6ZRP0 262 aa17.8■□□□□ 0.44
HOXC6-201ENST00000243108 RLN3Q8WXF3 142 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms