RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 BCCIPQ9P287 314 aaKnown RBP eCLIP14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 FANCMQ8IYD8 2048 aa14.71□□□□□ -0.06
SUPT4H1-201ENST00000225504 CCDC163A0A0D9SF12 145 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 LRRD1A4D1F6 860 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 NNMTP40261 264 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 LLGL1Q15334 1064 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 PARP15Q460N3 678 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 RETSATQ6NUM9 610 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 KIAA1324Q6UXG2 1013 aaKnown RBP14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 Q6ZVU0 165 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 OR2T3Q8NH03 318 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 KIAA1524Q8TCG1 905 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 TNKS2Q9H2K2 1166 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 KCNF1Q9H3M0 494 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 PRDM16Q9HAZ2 1276 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 FCF1Q9Y324 198 aaKnown RBP14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 PCDHGA2Q9Y5H1 932 aa14.7□□□□□ -0.06
SUPT4H1-201ENST00000225504 EDDM13A0A1B0GTR0 161 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 TARSL2A2RTX5 802 aaKnown RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 RNF103O00237 685 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 BNIP3LO60238 219 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 PALMO75781 387 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 KRT1P04264 644 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 ETFBP38117 255 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 SERPINH1P50454 418 aaKnown RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 RPS14P62263 151 aaKnown RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 SLC20A2Q08357 652 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 MAP7D1Q3KQU3 841 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 TMCO3Q6UWJ1 677 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 FAF2Q96CS3 445 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 RNF157Q96PX1 679 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 IRF2BPLQ9H1B7 796 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 RSPH9Q9H1X1 276 aaPredicted RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 RCOR3Q9P2K3 495 aaPredicted RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 NYNRINQ9P2P1 1898 aaKnown RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 MBD1Q9UIS9 605 aaPredicted RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 HPCAL4Q9UM19 191 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 DFFAO00273 331 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 MAP3K6O95382 1288 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 BCKDHBP21953 392 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 NBL1P41271 181 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 METAP1P53582 386 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 SLC10A2Q12908 348 aaPredicted RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 CYTH1Q15438 398 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 NCBP2-AS2Q69YL0 99 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 MFSD7Q6UXD7 560 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 MMAAQ8IVH4 418 aaKnown RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 MAP7D3Q8IWC1 876 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 CHST14Q8NCH0 376 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 OR2A12Q8NGT7 310 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 LRRN4Q8WUT4 740 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 GAB3Q8WWW8 586 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 ANP32BQ92688 251 aaKnown RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 PRCCQ92733 491 aaPredicted RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 SIPA1Q96FS4 1042 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZNF670Q9BS34 389 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 PDFQ9HBH1 243 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 ITM2CQ9NQX7 267 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 SARDHQ9UL12 918 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 GUCA1BQ9UMX6 200 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 ARIH1Q9Y4X5 557 aaPredicted RBP14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 CAPN6Q9Y6Q1 641 aa14.69□□□□□ -0.06
SUPT4H1-201ENST00000225504 VPS13AQ96RL7 3174 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 ARHGAP42A6NI28 874 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZBTB24O43167 697 aaPredicted RBP14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 PRAMEF11O60813 436 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 RPP40O75818 363 aaKnown RBP14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 KRT10P13645 584 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 P2RY2P41231 377 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 PEX5P50542 639 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 DNA2P51530 1060 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 GBE1Q04446 702 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 PAFAH1B3Q15102 231 aaKnown RBP14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 LPAL2Q16609 132 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 USP39Q53GS9 565 aaKnown RBP14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 C22orf39Q6P5X5 142 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 NT5DC3Q86UY8 548 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 LZTR1Q8N653 840 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 VOPP1Q96AW1 172 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 LZTFL1Q9NQ48 299 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 DDX56Q9NY93 547 aaKnown RBP14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 DONSONQ9NYP3 566 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 CYP8B1Q9UNU6 501 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 PPP2R2CQ9Y2T4 447 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 PCDHA3Q9Y5H8 950 aa14.68□□□□□ -0.06
SUPT4H1-201ENST00000225504 ABCA7Q8IZY2 2146 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 PLK4O00444 970 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 MCF2LO15068 1137 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 PSTPIP1O43586 416 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 MFSD11O43934 449 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 FTCDO95954 541 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 PTMAP06454 111 aaKnown RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 CTSLP07711 333 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 CCDC175P0C221 793 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 C7P10643 843 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 GKP32189 559 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 CTNNA1P35221 906 aaKnown RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 CDKN2BP42772 138 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 TPMTP51580 245 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms