RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Pcdhgb5Q91XX5 926 aa12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Tfap2dQ91ZK0 452 aa12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 NtpcrQ9CQA9 190 aaKnown RBP12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 PmpcbQ9CXT8 489 aa12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Phf6Q9D4J7 364 aa12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 IdeQ9JHR7 1019 aa12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Stk4Q9JI11 487 aa12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Arl10Q9QXJ4 243 aa12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Bag6Q9Z1R2 1154 aaKnown RBP12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Anapc1P53995 1944 aaKnown RBP12.41□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Scgb2b11A0A087WR49 112 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Nlrp1bA1Z198 1177 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Gm14459A2BI73 179 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Apold1E9Q0X2 246 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Zfp169E9Q3R6 731 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Vmn2r88L7N1W8 857 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 SiaeP70665 541 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Ddr1Q03146 911 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Faf2Q3TDN2 445 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Fam193bQ3U2K0 892 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Armc7Q3UJZ3 198 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Gcnt3Q5JCT0 437 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 OgdhQ60597 1023 aaKnown RBP12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 HrQ61645 1182 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Znf280cQ6P3Y5 742 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Gm6377Q8BHV4 303 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Trmt2bQ8BQJ6 493 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 MdficQ8BX65 247 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Trerf1Q8BXJ2 1205 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Tmem72Q8C3K5 275 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Gatad2aQ8CHY6 629 aaKnown RBP12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Kat14Q8CID0 779 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Lgi4Q8K1S1 537 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Stap2Q8R0L1 411 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Cdkn2aipnlQ9D211 116 aaKnown RBP12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Slc23a2Q9EPR4 648 aa12.4□□□□□ -0.42
Ccdc28a-202ENSMUST00000080860 Znf536Q8K083 1302 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 BptfA2A654 3036 aaKnown RBP12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm28729A0A1B0GSW2 409 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Faap100A2ACJ2 879 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm16430A6X8J1 155 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm6205E9PZS2 359 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm973E9Q295 1059 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Akap1O08715 857 aaKnown RBP12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Ap3d1O54774 1199 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Soat2O88908 525 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 P01810 119 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 H2afzP0C0S6 128 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 HdcP23738 662 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Marcksl1P28667 200 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Ptk2P34152 1090 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Psen1P49769 467 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Atxn1P54254 791 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Itga4Q00651 1039 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Cep76Q0VEJ0 659 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 H2afvQ3THW5 128 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Cog7Q3UM29 770 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Kdm7aQ3UWM4 940 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Odr4Q4PJX1 447 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Taar8aQ5QD07 344 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Zkscan4Q5SZT6 480 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tcf4Q60722 670 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Mtnr1aQ61184 353 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Pde1aQ61481 565 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Mettl20Q80ZM3 255 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Pnpla2Q8BJ56 486 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Nop53Q8BK35 484 aaKnown RBP12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Wdr59Q8C0M0 992 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Sh3rf3Q8C120 878 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm6367Q8C6L9 287 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Kdm1bQ8CIG3 826 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tmem259Q8CIV2 574 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tldc1Q8K0P3 455 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Spp2Q8K1I3 203 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Spata4Q8K3V1 295 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 RhoqQ8R527 205 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Srgap2Q91Z67 1071 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Usp11Q99K46 921 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Ift43Q9DA69 206 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 ParvaQ9EPC1 372 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Vstm4T1NXB5 319 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 PikfyveQ9Z1T6 2097 aa12.39□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Pde4dipQ80YT7 2224 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Olfr316A0A0N4SVP2 306 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 CatsperbA2RTF1 1109 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Vmn2r14E9Q759 848 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Foxn2E9Q7L6 429 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 H2-M9O19442 342 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 EdaO54693 391 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tap1P21958 724 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 ZfaP23607 742 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Bpifa1P97361 278 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Prss57Q14B24 284 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Sec31aQ3UPL0 1230 aaKnown RBP12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tmtc1Q3UV71 942 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Ppm1hQ3UYC0 513 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Olfr318Q5NCD7 306 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Itga7Q61738 1179 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Sh3gl1Q62419 368 aa12.38□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tmeff1Q6PFE7 372 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms