RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 MATN2O00339 956 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 TXNDC9O14530 226 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 CASQ2O14958 399 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 GPR32O75388 356 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 DAB1O75553 588 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 FBXO21O94952 628 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 JUNP05412 331 aaKnown RBP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 ADRA1BP35368 520 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 NUDT2P50583 147 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 RBBP5Q15291 538 aaKnown RBP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 POTEAQ6S8J7 498 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 SNX32Q86XE0 403 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 SPNS2Q8IVW8 549 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 GPC2Q8N158 579 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 B3GALNT2Q8NCR0 500 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 APPL2Q8NEU8 664 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 DUSP16Q9BY84 665 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 C20orf96Q9NUD7 363 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 UBQLN1Q9UMX0 589 aaKnown RBP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 SNX10Q9Y5X0 201 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 CENPFP49454 3210 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 COL1A2P08123 1366 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 PIM1P11309 404 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 NMBRP28336 390 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 PRDX6P30041 224 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 GLRBP48167 497 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 FOLH1Q04609 750 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 MPP3Q13368 585 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 GRM2Q14416 872 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 GRM3Q14832 879 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 PDK3Q15120 406 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 KCNMB4Q86W47 210 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 WNT8BQ93098 351 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 VPS39Q96JC1 886 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 FERMT1Q9BQL6 677 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 GDAP2Q9NXN4 497 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 ZDHHC2Q9UIJ5 367 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 SLC39A10Q9ULF5 831 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 BRCA1P38398 1863 aaKnown RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 ZSWIM8A7E2V4 1837 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 PHGDHO43175 533 aaKnown RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 DDNO94850 711 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 OR6B1O95007 311 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 FAM163BP0C2L3 166 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 CYP2B6P20813 491 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 IREB2P48200 963 aaKnown RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 PPP2R5DQ14738 602 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 TLR1Q15399 786 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 ARL13AQ5H913 290 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 KIAA0319Q5VV43 1072 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 METTL21CQ5VZV1 264 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 UGT2A3Q6UWM9 527 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 ST13P4Q8IZP2 240 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 RNF148Q8N7C7 305 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 SLC7A14Q8TBB6 771 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 KCNK16Q96T55 309 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 CDRT15Q96T59 188 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 ACE2Q9BYF1 805 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 NUF2Q9BZD4 464 aa14.09□□□□□ -0.15
PHGDH-233ENST00000642021 WDR6Q9NNW5 1121 aaKnown RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-233ENST00000642021 TMEM114B3SHH9 223 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 GRID2O43424 1007 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 MPOP05164 745 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 TFEBP19484 476 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 ALDH1A3P47895 512 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 GRIA4P48058 902 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 THOP1P52888 689 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 MS4A2Q01362 244 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF792Q3KQV3 632 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 OGFRL1Q5TC84 451 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-233ENST00000642021 CLEC20AQ6ZU45 233 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 LIMS2Q7Z4I7 341 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 DSELQ8IZU8 1212 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 TMEM40Q8WWA1 233 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 NCSTNQ92542 709 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 MARK4Q96L34 752 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 HNRNPABQ99729 332 aaKnown RBP14.08□□□□□ -0.16
PHGDH-233ENST00000642021 C1QTNF1Q9BXJ1 281 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 KATNBL1Q9H079 304 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 ILKAPQ9H0C8 392 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-233ENST00000642021 CACNG4Q9UBN1 327 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 STK39Q9UEW8 545 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 KCNH4Q9UQ05 1017 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 YJEFN3A6XGL0 299 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 PIGNO95427 931 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 XRCC1P18887 633 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-233ENST00000642021 NFKB1P19838 968 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 GABRB3P28472 473 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 AVPR1AP37288 418 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 DPP6P42658 865 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 ATXN3P54252 364 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-233ENST00000642021 NAGLUP54802 743 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 PKNOX1P55347 436 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 MAP3K7CLP57077 242 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 SEMA3BQ13214 749 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 SNAPC2Q13487 334 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 NOTUMQ6P988 496 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 TMC7Q7Z402 723 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 SATL1Q86VE3 508 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms