RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 OTOP3Q7RTS5 596 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 ABHD8Q96I13 439 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 CCDC77Q9BR77 488 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 MLPHQ9BV36 600 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 RETREG1Q9H6L5 497 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 RBM22Q9NW64 420 aaKnown RBP eCLIP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 NOVA2Q9UNW9 492 aaKnown RBP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 RGS16O15492 202 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-209ENST00000641074 CACNG3O60359 315 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 TSPAN3O60637 253 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 AP2A1O95782 977 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 LATS1O95835 1130 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 MLNP12872 115 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 TSHRP16473 764 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 ACVRL1P37023 503 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 SLC7A9P82251 487 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 ANO4Q32M45 955 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 KCTD11Q693B1 232 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 ZNF354CQ86Y25 554 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 MPP5Q8N3R9 675 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 FAM76AQ8TAV0 307 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 FATE1Q969F0 183 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 SIGLEC10Q96LC7 697 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 DDX50Q9BQ39 737 aaKnown RBP18.62■□□□□ 0.57
PHGDH-209ENST00000641074 CERS4Q9HA82 394 aa18.62■□□□□ 0.57
PHGDH-209ENST00000641074 TRAV19A0A0A6YYK7 116 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 SUN1O94901 812 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 HLA-DQB2P05538 268 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 PHBP35232 272 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 EPHA5P54756 1037 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 OLIG2Q13516 323 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 SERINC3Q13530 473 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 PDE12Q6L8Q7 609 aaKnown RBP18.61■□□□□ 0.57
PHGDH-209ENST00000641074 Q6ZNB5 142 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.61■□□□□ 0.57
PHGDH-209ENST00000641074 OR52K2Q8NGK3 314 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 TLCD1Q96CP7 247 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 LRRC39Q96DD0 335 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 OXNAD1Q96HP4 312 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-209ENST00000641074 SLC46A2Q9BY10 475 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 SP110Q9HB58 689 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 GLOD4Q9HC38 313 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 PIH1D1Q9NWS0 290 aaKnown RBP18.61■□□□□ 0.57
PHGDH-209ENST00000641074 DNMT3BQ9UBC3 853 aaKnown RBP18.61■□□□□ 0.57
PHGDH-209ENST00000641074 RABGEF1Q9UJ41 708 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 ADAM21Q9UKJ8 722 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 DOCK6Q96HP0 2047 aa18.61■□□□□ 0.57
PHGDH-209ENST00000641074 EXOC1LA0A1B0GW35 172 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CLDN11O75508 207 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 IVLP07476 585 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 PTPN2P17706 415 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 HOXA9P31269 272 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 HNRNPDQ14103 355 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 PRPSAP1Q14558 356 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 RBM23Q86U06 439 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 TTC16Q8NEE8 873 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 SHKBP1Q8TBC3 707 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 FBF1Q8TES7 1133 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 ARHGEF2Q92974 986 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 TCEAL4Q96EI5 215 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 FCRL5Q96RD9 977 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 UBP1Q9NZI7 540 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CTNNAL1Q9UBT7 734 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 ZC3H7BQ9UGR2 993 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 TTLL3Q9Y4R7 772 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CEP290O15078 2479 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 LAMA3Q16787 3333 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 A0A0D9SEW6 157 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CCDC85CA6NKD9 419 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 ERI2A8K979 691 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 USP12O75317 370 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CPP00450 1065 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 GCAP28676 217 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 RENBPP51606 427 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 MAGOHP61326 146 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 GNA12Q03113 381 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 IL10RBQ08334 325 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 SLC10A7Q0GE19 358 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 TNFAIP8L3Q5GJ75 292 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CHST9Q7L1S5 443 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 KLHDC8BQ8IXV7 354 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 SPATA22Q8NHS9 363 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 PABPC5Q96DU9 382 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CFAP36Q96G28 342 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 EBNA1BP2Q99848 306 aaKnown RBP18.6■□□□□ 0.57
PHGDH-209ENST00000641074 PLAC1Q9HBJ0 212 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 CFAP97Q9P2B7 532 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 MAD1L1Q9Y6D9 718 aa18.6■□□□□ 0.57
PHGDH-209ENST00000641074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-209ENST00000641074 A0A1B0GVM2 712 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 TCAF2A6NFQ2 919 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 MOSPD3O75425 235 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 RHOP08100 348 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 HNRNPA1P09651 372 aaKnown RBP eCLIP18.59■□□□□ 0.57
PHGDH-209ENST00000641074 PFKLP17858 780 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 MMP13P45452 471 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 NUMBP49757 651 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 SESN2P58004 480 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-209ENST00000641074 ZNF177Q13360 481 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-209ENST00000641074 ZNF697Q5TEC3 545 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms