RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 LRRC72A6NJI9 287 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 EPHB6O15197 1021 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 PLRG1O43660 514 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 MMEP08473 750 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 UCHL3P15374 230 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 CHRNB2P17787 502 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 ERCC5P28715 1186 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 CD38P28907 300 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 SULT1E1P49888 294 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 CCT8P50990 548 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 SULT2A1Q06520 285 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 BNIP3Q12983 259 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 RAPGEF1Q13905 1077 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 SMYD5Q6GMV2 418 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 EPS8L1Q8TE68 723 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 SAP25Q8TEE9 199 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 SLC20A1Q8WUM9 679 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 ELF4Q99607 663 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 SLC12A6Q9UHW9 1150 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 VPS51Q9UID3 782 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 NOCTQ9UK39 431 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 APOBEC2Q9Y235 224 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 HS3ST2Q9Y278 367 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 ACTL7AQ9Y615 435 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 CHD5Q8TDI0 1954 aa13.89□□□□□ -0.19
SOX2-OT-241ENST00000626948 ADAMTS20P59510 1910 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 FAM149AA5PLN7 773 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 F8VZ95 297 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 MCF2LO15068 1137 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 CLDN11O75508 207 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 MAT2AP31153 395 aaKnown RBP13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 GRK6P43250 576 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 CDH4P55283 916 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 NXPH1P58417 271 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 NOMO3P69849 1222 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 ZNF177Q13360 481 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 TCP11X2Q5H9J9 407 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 PIP5KL1Q5T9C9 394 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 CHST14Q8NCH0 376 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 OR2A12Q8NGT7 310 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 PIP4K2CQ8TBX8 421 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 CPA5Q8WXQ8 436 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 ARRDC3Q96B67 414 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 SERAC1Q96JX3 654 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 CFAP57Q96MR6 1250 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 CDC6Q99741 560 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 ACE2Q9BYF1 805 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 WDCPQ9H6R7 721 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 AASDHPPTQ9NRN7 309 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 LMBRD1Q9NUN5 540 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 VPS28Q9UK41 221 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 CACNA1GO43497 2377 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 BPTFQ12830 3046 aa13.88□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3DA0A087WVF3 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3IA0A087WXS9 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3EA0A087X179 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3KA0A087X1G2 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3FA6NER0 549 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3LB9A6J9 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TNFSF14O43557 240 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 GJB6O95452 261 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 CD160O95971 181 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3HP0C7X1 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 RRM1P23921 792 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 SCNN1AP37088 669 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 DNAJC3Q13217 504 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 SUZ12Q15022 739 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 SMAD1Q15797 465 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 ACCSLQ4AC99 568 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 BRMS1LQ5PSV4 323 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 SFMBT2Q5VUG0 894 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 CDKAL1Q5VV42 579 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3GQ6DHY5 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3CQ6IPX1 549 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 DHRS13Q6UX07 377 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 LINGO4Q6UY18 593 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TFAP2DQ7Z6R9 452 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TBC1D3Q8IZP1 549 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 EMC1Q8N766 993 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TMEM35BQ8NCS4 154 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 OR7D4Q8NG98 312 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 OR8D1Q8WZ84 308 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 C18orf8Q96DM3 657 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 NOX5Q96PH1 765 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 NDFIP2Q9NV92 336 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 TAB2Q9NYJ8 693 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 NEU3Q9UQ49 428 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
SOX2-OT-241ENST00000626948 ACACAQ13085 2346 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms