RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 RIOK3O14730 519 aaKnown RBP14.31□□□□□ -0.12
SNX1-214ENST00000625244 AQP9O43315 295 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 ACSL4O60488 711 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 EXOC3O60645 756 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 PRAMEF10O60809 474 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 RPN1P04843 607 aaKnown RBP14.31□□□□□ -0.12
SNX1-214ENST00000625244 CD58P19256 250 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 CD97P48960 835 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 SLC11A2P49281 568 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 ZACNQ401N2 412 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 FAM46CQ5VWP2 391 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 BSPRYQ5W0U4 402 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 PTAR1Q7Z6K3 402 aaPredicted RBP14.31□□□□□ -0.12
SNX1-214ENST00000625244 DTX1Q86Y01 620 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 CFAP52Q8N1V2 620 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 LMX1AQ8TE12 382 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 TAF4BQ92750 862 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 PPP1R13BQ96KQ4 1090 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 BMFQ96LC9 184 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 SLC12A9Q9BXP2 914 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 APOBEC3GQ9HC16 384 aaKnown RBP14.31□□□□□ -0.12
SNX1-214ENST00000625244 TMPRSS4Q9NRS4 437 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 GPR27Q9NS67 375 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 FOXJ2Q9P0K8 574 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 TUBD1Q9UJT1 453 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 YJEFN3A6XGL0 299 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 E7ENQ6 273 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 AGRPO00253 132 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 TULP2O00295 520 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 TPP1O14773 563 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 MTSS1O43312 755 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 MOCS3O95396 460 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 IGLV3-27P01718 113 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 JMJD7P0C870 316 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 ITIH1P19827 911 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 GJB2P29033 226 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 STAT6P42226 847 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 SNRPFP62306 86 aaKnown RBP14.3□□□□□ -0.12
SNX1-214ENST00000625244 ZNF394Q53GI3 561 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 PIP5KL1Q5T9C9 394 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 HORMAD1Q86X24 394 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 SPATA20Q8TB22 786 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 OR8D1Q8WZ84 308 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 NAT6Q93015 286 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 HEXIM2Q96MH2 286 aaKnown RBP14.3□□□□□ -0.12
SNX1-214ENST00000625244 IL12RB2Q99665 862 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 STRADBQ9C0K7 418 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 NUCKS1Q9H1E3 243 aaKnown RBP14.3□□□□□ -0.12
SNX1-214ENST00000625244 FBXO2Q9UK22 296 aaPredicted RBP14.3□□□□□ -0.12
SNX1-214ENST00000625244 ZFR2Q9UPR6 939 aaKnown RBP14.3□□□□□ -0.12
SNX1-214ENST00000625244 PCDHB11Q9Y5F2 797 aa14.3□□□□□ -0.12
SNX1-214ENST00000625244 SPTY2D1-AS1A0A0U1RR47 76 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 POM121BA6NF01 834 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 A6NNZ2 444 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 H3BM21 787 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 AGFG2O95081 481 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 LUC7L3O95232 432 aaKnown RBP14.29□□□□□ -0.12
SNX1-214ENST00000625244 RNF224P0DH78 156 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 JUNDP17535 347 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 ETV5P41161 510 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 RPIAP49247 311 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 DCAF6Q58WW2 860 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 SEL1L3Q68CR1 1132 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 ZNF787Q6DD87 383 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 NEK5Q6P3R8 708 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 SV2AQ7L0J3 742 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 PARGQ86W56 976 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 DCP2Q8IU60 420 aaKnown RBP14.29□□□□□ -0.12
SNX1-214ENST00000625244 UNC45BQ8IWX7 931 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 C12orf56Q8IXR9 622 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 JPH3Q8WXH2 748 aaPredicted RBP14.29□□□□□ -0.12
SNX1-214ENST00000625244 CYP3A43Q9HB55 503 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 LOXL2Q9Y4K0 774 aa14.29□□□□□ -0.12
SNX1-214ENST00000625244 TYW5A2RUC4 315 aaKnown RBP14.28□□□□□ -0.12
SNX1-214ENST00000625244 D6RAR5 112 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 C1QTNF3-AMACRE9PGA6 284 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 SPINT1O43278 529 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 GCATO75600 419 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 HLA-DRAP01903 254 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 TXLNAP40222 546 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 NNMTP40261 264 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 UQCRFS1P47985 274 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 MS4A13Q5J8X5 152 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 TPRG1LQ5T0D9 272 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 NUGGCQ68CJ6 796 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 ATCAYQ86WG3 371 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 CCDC117Q8IWD4 279 aaPredicted RBP14.28□□□□□ -0.12
SNX1-214ENST00000625244 HSCBQ8IWL3 235 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 USP7Q93009 1102 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 AZIN2Q96A70 460 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 TMX3Q96JJ7 454 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 TCEAL2Q9H3H9 227 aaPredicted RBP14.28□□□□□ -0.12
SNX1-214ENST00000625244 PADI4Q9UM07 663 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.28□□□□□ -0.12
SNX1-214ENST00000625244 HS3ST3A1Q9Y663 406 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 CLIC4Q9Y696 253 aa14.28□□□□□ -0.12
SNX1-214ENST00000625244 SCN8AQ9UQD0 1980 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms