RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 STK10O94804 968 aaKnown RBP18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 ZSCAN5DPP0CG00 497 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 CSKP41240 450 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 VPS41P49754 854 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 GUCY2DQ02846 1103 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 ZNF33AQ06730 810 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 HTR4Q13639 388 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 LEXMQ3ZCV2 418 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 TIGD7Q6NT04 549 aaPredicted RBP18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 RTP4Q96DX8 246 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 RPP25Q9BUL9 199 aaKnown RBP18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 PARD6BQ9BYG5 372 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 TRIM31Q9BZY9 425 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 ANKZF1Q9H8Y5 726 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 PCDH9Q9HC56 1237 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 ARGLU1Q9NWB6 273 aaPredicted RBP18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 KIAA1522Q9P206 1035 aaPredicted RBP18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 RAB21Q9UL25 225 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 ZSCAN5CA6NGD5 496 aaPredicted RBP18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 ANHXE9PGG2 379 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 RNF103O00237 685 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 MZF1P28698 734 aaPredicted RBP18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 GDI1P31150 447 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 ACTN2P35609 894 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 OXCT1P55809 520 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 GAD2Q05329 585 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 TNK2Q07912 1038 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 LMAN2Q12907 356 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 FAM182AQ5T1J6 154 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 CCHCR1Q8TD31 782 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 ERP44Q9BS26 406 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 TRMT61BQ9BVS5 477 aaKnown RBP18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 PHF7Q9BWX1 381 aaPredicted RBP18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 ECT2Q9H8V3 914 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 HPS4Q9NQG7 708 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 VPS28Q9UK41 221 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 HPCAL4Q9UM19 191 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 TARSL2A2RTX5 802 aaKnown RBP18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 J3KR12 359 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 MATN3O15232 486 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 CHADO15335 359 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 HOXC11O43248 304 aaPredicted RBP18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 CD70P32970 193 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 CPA6Q8N4T0 437 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 NAT16Q8N8M0 369 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 ZNF557Q8N988 423 aaPredicted RBP18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 CCDC110Q8TBZ0 833 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 FEM1AQ9BSK4 669 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 CEP41Q9BYV8 373 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 DPH5Q9H2P9 285 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 EPB41L5Q9HCM4 733 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 ABCB8Q9NUT2 735 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 MIA3Q5JRA6 1907 aa18.2■□□□□ 0.5
PTCHD3-202ENST00000622555 ESYT3A0FGR9 886 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 C5orf60A6NFR6 353 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 CBX4O00257 560 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 KDELR3O43731 214 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 PRAMEF11O60813 436 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 CCNB1P14635 433 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 PTPN3P26045 913 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 ADCY8P40145 1251 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 IL10RBQ08334 325 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 WASHC5Q12768 1159 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 SMAD2Q15796 467 aaKnown RBP18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 P3H1Q32P28 736 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 PTCRAQ6ISU1 281 aaPredicted RBP18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 USP33Q8TEY7 942 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 NSMCE1Q8WV22 266 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 ACE2Q9BYF1 805 aaPredicted RBP18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 OR51B4Q9Y5P0 310 aa18.19■□□□□ 0.5
PTCHD3-202ENST00000622555 A0A0A0MRY4 1105 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 OTOL1A6NHN0 477 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 CACNG3O60359 315 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 GCATO75600 419 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 JCHAINP01591 159 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 GLDCP23378 1020 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 HLA-FP30511 346 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 RPL22P35268 128 aaKnown RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 GPS1Q13098 491 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ZBTB17Q13105 803 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 NR1H3Q13133 447 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 RUNX3Q13761 415 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 BRD3Q15059 726 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 DUPD1Q68J44 220 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ASTLQ6HA08 431 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 LEKR1Q6ZMV7 388 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ARHGEF18Q6ZSZ5 1173 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 APCDD1Q8J025 514 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 MAFAQ8NHW3 353 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ALG14Q96F25 216 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 SPATA13Q96N96 652 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 XPO6Q96QU8 1125 aaKnown RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 SLC2A11Q9BYW1 496 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 OGFRQ9NZT2 677 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 PAK5Q9P286 719 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 KLHL8Q9P2G9 620 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 SNX24Q9Y343 169 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 TICRRQ7Z2Z1 1910 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ATP8B1O43520 1251 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 NEBLO76041 1014 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms