RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, human

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-229	ENST00000620292	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.22	□□□□□ -1.73
CBWD1-229	ENST00000620292	CENPF	P49454	3210 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	RRH	O14718	337 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	CNOT3	O75175	753 aa	Known RBP	4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	CAMTA2	O94983	1202 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	SGPL1	O95470	568 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	ALAD	P13716	330 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	NDUFS1	P28331	727 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	MAP2K2	P36507	400 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	CDK7	P50613	346 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	ALDH18A1	P54886	795 aa	Known RBP	4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	EIF5	P55010	431 aa	Known RBP	4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	GHRHR	Q02643	423 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	GRM4	Q14833	912 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	KRT72	Q14CN4	511 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	BRD3	Q15059	726 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	ELF2	Q15723	593 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	CC2D1B	Q5T0F9	858 aa	Known RBP	4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	ZNF425	Q6IV72	752 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	C16orf89	Q6UX73	402 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	KYAT3	Q6YP21	454 aa	Known RBP	4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	CNBD1	Q8NA66	436 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	ZNF527	Q8NB42	609 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	SLC22A17	Q8WUG5	538 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	WDR60	Q8WVS4	1066 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	NPIPB3	Q92617	1050 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	PMM1	Q92871	262 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	RPL36AL	Q969Q0	106 aa	Known RBP	4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	FAR2	Q96K12	515 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	EIF3C	Q99613	913 aa	Known RBP	4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	EPS8L2	Q9H6S3	715 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	PLCB1	Q9NQ66	1216 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	FBXO28	Q9NVF7	368 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	TNFRSF18	Q9Y5U5	241 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	ABCC12	Q96J65	1359 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	SCN9A	Q15858	1988 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	BRCA2	P51587	3418 aa		4.21	□□□□□ -1.74
CBWD1-229	ENST00000620292	COL4A1	P02462	1669 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	WDR91	A4D1P6	747 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	SYT5	O00445	386 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	NKX2-8	O15522	239 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	USP12	O75317	370 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	SKAP2	O75563	359 aa	Predicted RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	TOP3B	O95985	862 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	HSP90AB1	P08238	724 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	IGFBP2	P18065	325 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	PDIA3	P30101	505 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	IDUA	P35475	653 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	DMWD	Q09019	674 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	GALNT1	Q10472	559 aa	Predicted RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	CBFB	Q13951	182 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	KPNB1	Q14974	876 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	ZACN	Q401N2	412 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	GLE1	Q53GS7	698 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	EARS2	Q5JPH6	523 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	C1orf141	Q5JVX7	400 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	TFAP2D	Q7Z6R9	452 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	RFX6	Q8HWS3	928 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	GPC2	Q8N158	579 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	WIPF2	Q8TF74	440 aa	Predicted RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	MASTL	Q96GX5	879 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	ZNF778	Q96MU6	729 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	SIGLEC11	Q96RL6	698 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	MPHOSPH6	Q99547	160 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	PRPF18	Q99633	342 aa	Known RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	ELOVL1	Q9BW60	279 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	TM2D2	Q9BX73	214 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	ERVK-5	Q9HDB9	667 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	MLXIPL	Q9NP71	852 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	OBP2B	Q9NPH6	170 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	TUBA8	Q9NY65	449 aa	Predicted RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	DAAM1	Q9Y4D1	1078 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	ZSWIM8	A7E2V4	1837 aa		4.2	□□□□□ -1.74
CBWD1-229	ENST00000620292	COL6A3	P12111	3177 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	FAM90A18P	A6NE21	464 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	FAM90A16P	A6NEW6	464 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	AQP12B	A6NM10	295 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	FAM90A9P	A6NNJ1	464 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	LGALS16	A8MUM7	142 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	FAM90A5P	A8MXJ8	464 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	KCNU1	A8MYU2	1149 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	TCERG1	O14776	1098 aa	Known RBP	4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	INPPL1	O15357	1258 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	RNMT	O43148	476 aa	Known RBP	4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	ASNA1	O43681	348 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	TLR2	O60603	784 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	MOSPD3	O75425	235 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	RPP40	O75818	363 aa	Known RBP	4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	CER1	O95813	267 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	PLAU	P00749	431 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	ENO1	P06733	434 aa	Known RBP	4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	SLC3A2	P08195	630 aa	Known RBP	4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	FAM90A15P	P0C7V4	464 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	FAM90A14P	P0C7W9	464 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	CTSA	P10619	480 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	PEPD	P12955	493 aa		4.19	□□□□□ -1.74
CBWD1-229	ENST00000620292	RPS6KB1	P23443	525 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms