RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-229ENST00000620292 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
CBWD1-229ENST00000620292 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
CBWD1-229ENST00000620292 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
CBWD1-229ENST00000620292 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
CBWD1-229ENST00000620292 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
CBWD1-229ENST00000620292 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
CBWD1-229ENST00000620292 FOXD1Q16676 465 aa16.24■□□□□ 0.19
CBWD1-229ENST00000620292 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
CBWD1-229ENST00000620292 ADRA2BP18089 450 aa15.57■□□□□ 0.08
CBWD1-229ENST00000620292 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
CBWD1-229ENST00000620292 MSH5O43196 834 aa15.24■□□□□ 0.03
CBWD1-229ENST00000620292 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
CBWD1-229ENST00000620292 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
CBWD1-229ENST00000620292 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
CBWD1-229ENST00000620292 KCNA4P22459 653 aa14.06□□□□□ -0.16
CBWD1-229ENST00000620292 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
CBWD1-229ENST00000620292 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
CBWD1-229ENST00000620292 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
CBWD1-229ENST00000620292 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
CBWD1-229ENST00000620292 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
CBWD1-229ENST00000620292 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-229ENST00000620292 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
CBWD1-229ENST00000620292 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
CBWD1-229ENST00000620292 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
CBWD1-229ENST00000620292 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
CBWD1-229ENST00000620292 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
CBWD1-229ENST00000620292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
CBWD1-229ENST00000620292 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
CBWD1-229ENST00000620292 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
CBWD1-229ENST00000620292 ZBTB22O15209 634 aa12.95□□□□□ -0.34
CBWD1-229ENST00000620292 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
CBWD1-229ENST00000620292 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
CBWD1-229ENST00000620292 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
CBWD1-229ENST00000620292 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
CBWD1-229ENST00000620292 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
CBWD1-229ENST00000620292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
CBWD1-229ENST00000620292 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
CBWD1-229ENST00000620292 POTEHQ6S545 545 aa12.66□□□□□ -0.38
CBWD1-229ENST00000620292 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
CBWD1-229ENST00000620292 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
CBWD1-229ENST00000620292 APLP2Q06481 763 aa12.55□□□□□ -0.4
CBWD1-229ENST00000620292 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
CBWD1-229ENST00000620292 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
CBWD1-229ENST00000620292 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-229ENST00000620292 CAPN15O75808 1086 aa12.36□□□□□ -0.43
CBWD1-229ENST00000620292 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-229ENST00000620292 DSG3P32926 999 aa12.23□□□□□ -0.45
CBWD1-229ENST00000620292 POLA2Q14181 598 aa12.12□□□□□ -0.47
CBWD1-229ENST00000620292 ABCB7O75027 752 aa12.1□□□□□ -0.47
CBWD1-229ENST00000620292 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
CBWD1-229ENST00000620292 FBLN2P98095 1184 aa11.9□□□□□ -0.5
CBWD1-229ENST00000620292 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
CBWD1-229ENST00000620292 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
CBWD1-229ENST00000620292 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
CBWD1-229ENST00000620292 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
CBWD1-229ENST00000620292 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
CBWD1-229ENST00000620292 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
CBWD1-229ENST00000620292 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
CBWD1-229ENST00000620292 FKBP8Q14318 412 aa11.6□□□□□ -0.55
CBWD1-229ENST00000620292 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
CBWD1-229ENST00000620292 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
CBWD1-229ENST00000620292 PROM2Q8N271 834 aa11.53□□□□□ -0.56
CBWD1-229ENST00000620292 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
CBWD1-229ENST00000620292 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
CBWD1-229ENST00000620292 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
CBWD1-229ENST00000620292 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
CBWD1-229ENST00000620292 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
CBWD1-229ENST00000620292 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
CBWD1-229ENST00000620292 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
CBWD1-229ENST00000620292 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
CBWD1-229ENST00000620292 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
CBWD1-229ENST00000620292 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
CBWD1-229ENST00000620292 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
CBWD1-229ENST00000620292 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
CBWD1-229ENST00000620292 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
CBWD1-229ENST00000620292 HAX1O00165 279 aa11.02□□□□□ -0.65
CBWD1-229ENST00000620292 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
CBWD1-229ENST00000620292 PIP4P2Q8N4L2 257 aa10.99□□□□□ -0.65
CBWD1-229ENST00000620292 MIER1Q8N108 512 aa10.98□□□□□ -0.65
CBWD1-229ENST00000620292 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
CBWD1-229ENST00000620292 PLCD3Q8N3E9 789 aa10.95□□□□□ -0.66
CBWD1-229ENST00000620292 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
CBWD1-229ENST00000620292 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
CBWD1-229ENST00000620292 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
CBWD1-229ENST00000620292 ZBTB47Q9UFB7 747 aaPredicted RBP10.91□□□□□ -0.66
CBWD1-229ENST00000620292 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
CBWD1-229ENST00000620292 EVX2Q03828 476 aa10.89□□□□□ -0.67
CBWD1-229ENST00000620292 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
CBWD1-229ENST00000620292 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
CBWD1-229ENST00000620292 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
CBWD1-229ENST00000620292 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
CBWD1-229ENST00000620292 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
CBWD1-229ENST00000620292 NUBP1P53384 320 aa10.77□□□□□ -0.69
CBWD1-229ENST00000620292 LHX8Q68G74 356 aa10.76□□□□□ -0.69
CBWD1-229ENST00000620292 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
CBWD1-229ENST00000620292 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
CBWD1-229ENST00000620292 GSE1Q14687 1217 aa10.64□□□□□ -0.71
CBWD1-229ENST00000620292 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
CBWD1-229ENST00000620292 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
CBWD1-229ENST00000620292 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms