RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ARRB1P49407 418 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 CNTN1Q12860 1018 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 MTA1Q13330 715 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 C5orf22Q49AR2 442 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 FAM46CQ5VWP2 391 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 PRPF39Q86UA1 669 aaKnown RBP21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 SPATS2Q86XZ4 545 aaKnown RBP21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 SH2D3CQ8N5H7 860 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 EID2Q8N6I1 236 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 ZNF397Q8NF99 534 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 PIP4K2CQ8TBX8 421 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 SIK2Q9H0K1 926 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 ANLNQ9NQW6 1124 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D30Q9Y2I9 924 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 PCDHGA1Q9Y5H4 931 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 C1QTNF3-AMACRE9PGA6 284 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 I6L893 689 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 MCF2LO15068 1137 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 ALOX15BO15296 676 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 BNIP3LO60238 219 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 CNTN5O94779 1100 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 ADCY5O95622 1261 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 TFE3P19532 575 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 CDH4P55283 916 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 CLDN6P56747 220 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 BNIP3Q12983 259 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 PDZD3Q86UT5 571 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 TRIM69Q86WT6 500 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 PDCD7Q8N8D1 485 aaKnown RBP21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 MFSD2AQ8NA29 543 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 HNRNPLLQ8WVV9 542 aaKnown RBP21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 NPY6RQ99463 290 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 MUC3BQ9H195 1237 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 ERVMER34-1Q9H9K5 563 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 ARHGEF38Q9NXL2 777 aa21.33■■□□□ 1.01
TRAPPC3-208ENST00000616074 IGSF10Q6WRI0 2623 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 RFPL3O75679 317 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 SRCP12931 536 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 ZNF18P17022 549 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 RXRGP48443 463 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 SNX16P57768 344 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 UBE2HP62256 183 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 ALFQ53S48 1182 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 SMYD5Q6GMV2 418 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 TMPRSS12Q86WS5 348 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 OXR1Q8N573 874 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 PSMB7Q99436 277 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 TKTL2Q9H0I9 626 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 DMTF1Q9Y222 760 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 SNX10Q9Y5X0 201 aa21.32■■□□□ 1
TRAPPC3-208ENST00000616074 ARID1BQ8NFD5 2236 aaPredicted RBP21.31■■□□□ 1
TRAPPC3-208ENST00000616074 SNAP91O60641 907 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 MT-CO1P00395 513 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 CTSLP07711 333 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 RHOCP08134 193 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 NUDT1P36639 197 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 CXCR3P49682 368 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 ACADVLP49748 655 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 SULT1E1P49888 294 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 TAS2R38P59533 333 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 RNASE9P60153 205 aaKnown RBP21.31■■□□□ 1
TRAPPC3-208ENST00000616074 MAN2A1Q16706 1144 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 SFMBT2Q5VUG0 894 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 DPY19L2P1Q6NXN4 242 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 KANSL1Q7Z3B3 1105 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 ZDHHC17Q8IUH5 632 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 FAM71AQ8IYT1 594 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 ZNF683Q8IZ20 524 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 MLKLQ8NB16 471 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 WDCPQ9H6R7 721 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 RRN3Q9NYV6 651 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.31■■□□□ 11e-21■■□□□ 14.2
TRAPPC3-208ENST00000616074 HS3ST2Q9Y278 367 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 CA5BQ9Y2D0 317 aa21.31■■□□□ 1
TRAPPC3-208ENST00000616074 URB1O60287 2271 aaKnown RBP21.31■■□□□ 1
TRAPPC3-208ENST00000616074 DOCK4Q8N1I0 1966 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 MYLKQ15746 1914 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 FAM170AA1A519 330 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 KRT83P78385 493 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 TPD52L1Q16890 204 aaPredicted RBP21.3■■□□□ 1
TRAPPC3-208ENST00000616074 BRMS1LQ5PSV4 323 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 PIP5KL1Q5T9C9 394 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 IQCHQ86VS3 1027 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 ATP11CQ8NB49 1132 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 TSC1Q92574 1164 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 NT5C3BQ969T7 300 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 SCUBE2Q9NQ36 999 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 TMPRSS4Q9NRS4 437 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 VPS51Q9UID3 782 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 STAP1Q9ULZ2 295 aa21.3■■□□□ 1
TRAPPC3-208ENST00000616074 K7ERQ8 282 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 C1SP09871 688 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 CDH5P33151 784 aaPredicted RBP21.29■■□□□ 1
TRAPPC3-208ENST00000616074 OVGP1Q12889 678 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 STAT4Q14765 748 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 SETMARQ53H47 684 aaPredicted RBP21.29■■□□□ 1
TRAPPC3-208ENST00000616074 MIIPQ5JXC2 388 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 TMEM35BQ8NCS4 154 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 OR2A12Q8NGT7 310 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 PGAP3Q96FM1 320 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms