RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CALN1Q9BXU9 219 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 TPX2Q9ULW0 747 aaKnown RBP13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 SNX10Q9Y5X0 201 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 SMG1Q96Q15 3661 aaKnown RBP13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 E9PAM4 449 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 M0QYT0 321 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLC7A4O43246 635 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 TLX3O43711 291 aaPredicted RBP13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 SNAP91O60641 907 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 MAGEC1O60732 1142 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 RNGTTO60942 597 aaKnown RBP13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 PAGE1O75459 146 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 ADCY5O95622 1261 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 ERBB2P04626 1255 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 RHOCP08134 193 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 THEGLP0DJG4 465 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 CKMT2P17540 419 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLC9A1P19634 815 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 GLDCP23378 1020 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 BECN1Q14457 450 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 MEA1Q16626 185 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 HS1BP3Q53T59 392 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 SFMBT2Q5VUG0 894 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 FBXL19Q6PCT2 694 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 TFAP2DQ7Z6R9 452 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 C14orf80Q86SX3 495 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 KLHDC7BQ96G42 594 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 NOX5Q96PH1 765 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLC2A13Q96QE2 648 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 FEM1AQ9BSK4 669 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 CAAP1Q9H8G2 361 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 PLCB1Q9NQ66 1216 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 DYRK4Q9NR20 520 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 DMTF1Q9Y222 760 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 HS3ST4Q9Y661 456 aa13.71□□□□□ -0.21
HMGB1P24-201ENST00000611897 TRPM6Q9BX84 2022 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 A0A1W2PQU0 124 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 PRAMEF26H0Y7S4 382 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 RRP8O43159 456 aaKnown RBP13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 SIGLEC6O43699 453 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 ATP9BO43861 1147 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 DAB1O75553 588 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 CNTN5O94779 1100 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 ENDOD1O94919 500 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 PCDH8O95206 1070 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 C1SP09871 688 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 PNMA6AP0CW24 399 aaPredicted RBP13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 SRCP12931 536 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 RRM1P23921 792 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 EIF2S3P41091 472 aaKnown RBP13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 RXRGP48443 463 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 SULT1E1P49888 294 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 PLK1P53350 603 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 MARSP56192 900 aaKnown RBP13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 CCDC173Q0VFZ6 552 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 LINGO4Q6UY18 593 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 GBP6Q6ZN66 633 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 C11orf57Q6ZUT1 292 aaPredicted RBP13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 TMC6Q7Z403 805 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 TRIM69Q86WT6 500 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 SH2D3CQ8N5H7 860 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 BAP1Q92560 729 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 TSC1Q92574 1164 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 ALG14Q96F25 216 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 CCDC114Q96M63 670 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 PDCL3Q9H2J4 239 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 TNKS2Q9H2K2 1166 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 ERVMER34-1Q9H9K5 563 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 PREBQ9HCU5 417 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 APEX2Q9UBZ4 518 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 CLCA2Q9UQC9 943 aa13.7□□□□□ -0.22
HMGB1P24-201ENST00000611897 K7ERQ8 282 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 TRIM38O00635 465 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 MCF2LO15068 1137 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 ALOX15BO15296 676 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 BRINP1O60477 761 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 CLDN11O75508 207 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 ZIC2O95409 532 aaPredicted RBP13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 MT-CO1P00395 513 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 CTSLP07711 333 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 GLI1P08151 1106 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 CDK4P11802 303 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 CHRNA3P32297 505 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 KRT9P35527 623 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 CLDN2P57739 230 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 TAS2R38P59533 333 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 KRT83P78385 493 aa13.69□□□□□ -0.22
HMGB1P24-201ENST00000611897 EXOC3L4Q17RC7 722 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms