RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 KCTD11Q693B1 232 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 SIGLEC10Q96LC7 697 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 ADAM21Q9UKJ8 722 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 NOVA2Q9UNW9 492 aaKnown RBP22.03■■□□□ 1.12
USP6NL-204ENST00000606752 J3KR12 359 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 TRDMT1O14717 391 aaKnown RBP22.03■■□□□ 1.12
USP6NL-204ENST00000606752 PSMD3O43242 534 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 GREM1O60565 184 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 CKMP06732 381 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 EPCAMP16422 314 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 PTPN2P17706 415 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 RENBPP51606 427 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 EPHA5P54756 1037 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 CHST9Q7L1S5 443 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 GLOD4Q9HC38 313 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 HCFC1R1Q9NWW0 138 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 YBX2Q9Y2T7 364 aaKnown RBP22.03■■□□□ 1.12
USP6NL-204ENST00000606752 SPAG6O75602 509 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 NEBLO76041 1014 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 HNRNPA1P09651 372 aaKnown RBP eCLIP22.02■■□□□ 1.12
USP6NL-204ENST00000606752 GJA1P17302 382 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 TTC39BQ5VTQ0 682 aaPredicted RBP22.02■■□□□ 1.12
USP6NL-204ENST00000606752 Q6ZNB5 142 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 ZNF354CQ86Y25 554 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 KLHDC8BQ8IXV7 354 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 TLCD1Q96CP7 247 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 ZNF419Q96HQ0 510 aaPredicted RBP22.02■■□□□ 1.12
USP6NL-204ENST00000606752 ABHD8Q96I13 439 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 FCRL5Q96RD9 977 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 STMN4Q9H169 189 aaPredicted RBP22.02■■□□□ 1.12
USP6NL-204ENST00000606752 MAGEH1Q9H213 219 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 SP110Q9HB58 689 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 DPP7Q9UHL4 492 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 RABGEF1Q9UJ41 708 aa22.02■■□□□ 1.12
USP6NL-204ENST00000606752 MYO7AQ13402 2215 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 SHROOM3Q8TF72 1996 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 A0A1B0GVM2 712 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 EXOC1LA0A1B0GW35 172 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 TCAF2A6NFQ2 919 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 CPP00450 1065 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 AGTP01019 485 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 MMP13P45452 471 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 IFNAR2P48551 515 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 IL10RBQ08334 325 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 SKIDA1Q1XH10 827 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 OTOP3Q7RTS5 596 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 NSMCE1Q8WV22 266 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 ARHGEF2Q92974 986 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 PPP1R2P1Q96PQ5 205 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 EBNA1BP2Q99848 306 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 MLPHQ9BV36 600 aaPredicted RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 SLC46A2Q9BY10 475 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 PPCSQ9HAB8 311 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 DNMT3BQ9UBC3 853 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 ZC3H7BQ9UGR2 993 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 LSM7Q9UK45 103 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 AAR2Q9Y312 384 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 MTCL1Q9Y4B5 1905 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 SDR42E2A6NKP2 422 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 NRG2O14511 850 aaPredicted RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 TSPAN3O60637 253 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 CDH16O75309 829 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 ACVRL1P37023 503 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 CCR2P41597 374 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 SGSHP51688 502 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 MAGOHP61326 146 aaKnown RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 GNA12Q03113 381 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 ZNF177Q13360 481 aaPredicted RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 SPARCL1Q14515 664 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 TNFAIP8L3Q5GJ75 292 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 STXBP5Q5T5C0 1151 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 MARC1Q5VT66 337 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 SETD3Q86TU7 594 aaPredicted RBP22.01■■□□□ 1.11
USP6NL-204ENST00000606752 FBF1Q8TES7 1133 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 ZNF510Q9Y2H8 683 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 MAD1L1Q9Y6D9 718 aa22.01■■□□□ 1.11
USP6NL-204ENST00000606752 PER2O15055 1255 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 XYLBO75191 536 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 ANXA9O76027 345 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 HLA-DQB2P05538 268 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 GSTA2P09210 222 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 DDX6P26196 483 aaKnown RBP eCLIP22■■□□□ 1.11
USP6NL-204ENST00000606752 PBX2P40425 430 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 EMC10Q5UCC4 262 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 HTR3DQ70Z44 454 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 TEX26Q8N6G2 289 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 LEMD2Q8NC56 503 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 SHKBP1Q8TBC3 707 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 PABPC5Q96DU9 382 aaKnown RBP22■■□□□ 1.11
USP6NL-204ENST00000606752 OXNAD1Q96HP4 312 aaPredicted RBP22■■□□□ 1.11
USP6NL-204ENST00000606752 ACSS3Q9H6R3 686 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 LRRC40Q9H9A6 602 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 FETUBQ9UGM5 382 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 TBC1D30Q9Y2I9 924 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 TTLL3Q9Y4R7 772 aa22■■□□□ 1.11
USP6NL-204ENST00000606752 PRAMEF11O60813 436 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 RHOP08100 348 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 NR1D1P20393 614 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 TNK2Q07912 1038 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms