RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 LNP1A1A4G5 178 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 MT-CO1P00395 513 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 SRCP12931 536 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 ACSL1P33121 698 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 MAPKAPK2P49137 400 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 ZNF252P-AS1Q0IIN9 211 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 SFSWAPQ12872 951 aaKnown RBP16.8■□□□□ 0.28
CIRBP-233ENST00000591622 TRIM14Q14142 442 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 TRIM61Q5EBN2 209 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 WDR45BQ5MNZ6 344 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 USP30Q70CQ3 517 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 VSTM4Q8IW00 320 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 ATP11CQ8NB49 1132 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 SPON2Q9BUD6 331 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 TRIM7Q9C029 511 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 BTBD1Q9H0C5 482 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 PCED1AQ9H1Q7 454 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 ATP13A1Q9HD20 1204 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 NDFIP2Q9NV92 336 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 NCKAP1Q9Y2A7 1128 aa16.8■□□□□ 0.28
CIRBP-233ENST00000591622 METTL12A8MUP2 240 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 MEI4A8MW99 385 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 CBX4O00257 560 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 SLC30A4O14863 429 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 MID1O15344 667 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 RNF8O76064 485 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 IL1BP01584 269 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 GLDCP23378 1020 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 SLC8A1P32418 973 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 ETFBP38117 255 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 LIMK1P53667 647 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 IRX4P78413 519 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 DUOXA1Q1HG43 343 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 RETSATQ6NUM9 610 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 SLC23A3Q6PIS1 610 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 LINGO4Q6UY18 593 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 Q6ZVU0 165 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 RABEPKQ7Z6M1 372 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 DSG4Q86SJ6 1040 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 RGL4Q8IZJ4 473 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 ARFGAP1Q8N6T3 406 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 OR8K1Q8NGG5 319 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 CEP76Q8TAP6 659 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 GANCQ8TET4 914 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 DNASE2BQ8WZ79 361 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 DNAJC7Q99615 494 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 EPAS1Q99814 870 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 RTKNQ9BST9 563 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 EDEM2Q9BV94 578 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 NUSAP1Q9BXS6 441 aaKnown RBP16.79■□□□□ 0.28
CIRBP-233ENST00000591622 ACE2Q9BYF1 805 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-233ENST00000591622 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 FBXL12Q9NXK8 326 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 DNAI1Q9UI46 699 aa16.79■□□□□ 0.28
CIRBP-233ENST00000591622 ABCA7Q8IZY2 2146 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 K7ERQ8 282 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 MCF2LO15068 1137 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 ALOX15BO15296 676 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 CREB3O43889 395 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 RNASEH2AO75792 299 aaKnown RBP16.78■□□□□ 0.28
CIRBP-233ENST00000591622 ZMPSTE24O75844 475 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 SEMA4FO95754 770 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 ADH1BP00325 375 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 SERPINF2P08697 491 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 C5AR1P21730 350 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 MAOBP27338 520 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 EPHB2P29323 1055 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 PSMD8P48556 350 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 CLCN6P51797 869 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 SLC20A2Q08357 652 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 STPG1Q5TH74 334 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 DCAF12L1Q5VU92 463 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 IL31Q6EBC2 164 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 ALKBH5Q6P6C2 394 aaKnown RBP16.78■□□□□ 0.28
CIRBP-233ENST00000591622 OR8D1Q8WZ84 308 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 OMDQ99983 421 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 THAP2Q9H0W7 228 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 MAGEH1Q9H213 219 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 C6orf106Q9H6K1 298 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-233ENST00000591622 SERGEFQ9UGK8 458 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 FZD4Q9ULV1 537 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 SLC6A14Q9UN76 642 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 DCHS1Q96JQ0 3298 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 SPAG17Q6Q759 2223 aa16.78■□□□□ 0.28
CIRBP-233ENST00000591622 THADAQ6YHU6 1953 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 CXorf51AA0A1B0GTR3 108 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 A0A1W2PP55 124 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 SMAD6O43541 496 aaKnown RBP16.77■□□□□ 0.28
CIRBP-233ENST00000591622 RAMP2O60895 175 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 CFIP05156 583 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 TPM1P09493 284 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 GNSP15586 552 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 ACVRL1P37023 503 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.28
CIRBP-233ENST00000591622 ARF5P84085 180 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 ACAP1Q15027 740 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 CCDC122Q5T0U0 273 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 ERMARDQ5T6L9 678 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 AADATQ8N5Z0 425 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms