RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 FNIP1Q8TF40 1166 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 PIGKQ92643 395 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF419Q96HQ0 510 aaPredicted RBP9.42□□□□□ -0.9
DNMT1-223ENST00000591239 HSPA12BQ96MM6 686 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 FAM129BQ96TA1 746 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 SPON2Q9BUD6 331 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 GPR174Q9BXC1 333 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 TRIM5Q9C035 493 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 THAP2Q9H0W7 228 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 TMEM74BQ9NUR3 256 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 NDFIP2Q9NV92 336 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 TMEM248Q9NWD8 314 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ZNHIT6Q9NWK9 470 aaKnown RBP9.42□□□□□ -0.9
DNMT1-223ENST00000591239 VPS51Q9UID3 782 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 HS3ST2Q9Y278 367 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 NUP205Q92621 2012 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 PRR5-ARHGAP8B1AHC4 643 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 K7ERQ8 282 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 CBX4O00257 560 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 MID1O15344 667 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 CREB3O43889 395 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 GDF9O60383 454 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 MFAP3LO75121 409 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 CYP1A2P05177 515 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 SRCP12931 536 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 GLDCP23378 1020 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 EPHB2P29323 1055 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 MIPP30301 263 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 SLC8A1P32418 973 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 MAPKAPK2P49137 400 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ADKP55263 362 aaKnown RBP9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ARHGAP8P85298 464 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 SEMA3BQ13214 749 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ELAVL3Q14576 367 aaKnown RBP9.41□□□□□ -0.9
DNMT1-223ENST00000591239 CST6Q15828 149 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 TTC31Q49AM3 519 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-223ENST00000591239 AASDHQ4L235 1098 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-223ENST00000591239 SYCP2LQ5T4T6 812 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ERMARDQ5T6L9 678 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 TCEAL6Q6IPX3 200 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 LINGO4Q6UY18 593 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 Q6ZVU0 165 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ATP11CQ8NB49 1132 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 CADM4Q8NFZ8 388 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 TCEAL3Q969E4 200 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 EPAS1Q99814 870 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 MAGEH1Q9H213 219 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ATP13A1Q9HD20 1204 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ABHD10Q9NUJ1 306 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 PCSK1NQ9UHG2 260 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 DNAI1Q9UI46 699 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 PILRBQ9UKJ0 227 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 SCML1Q9UN30 329 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 CEP192Q8TEP8 1941 aa9.41□□□□□ -0.9
DNMT1-223ENST00000591239 ATXN2Q99700 1313 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SSU72P8A0A1W2PR75 194 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 PATE3B3GLJ2 98 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 KHNYNO15037 678 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SMAD6O43541 496 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 PRPSAP2O60256 369 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RAMP2O60895 175 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 LRCH4O75427 683 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ZMPSTE24O75844 475 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ADH1BP00325 375 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 IL1BP01584 269 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SDHBP21912 280 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ACSL1P33121 698 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 HTR7P34969 479 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 HOXD12P35452 270 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ACVRL1P37023 503 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ETFBP38117 255 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 DPP6P42658 865 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ID4P47928 161 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 PSMD8P48556 350 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 CLCN6P51797 869 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 GALCP54803 685 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 IRX4P78413 519 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 GFPT1Q06210 699 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SLC20A2Q08357 652 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SFSWAPQ12872 951 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 TBX2Q13207 712 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 PIGHQ14442 188 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ACAP1Q15027 740 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 POLD3Q15054 466 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SLC18A3Q16572 532 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ASTE1Q2TB18 679 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 PEAR1Q5VY43 1037 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 IL31Q6EBC2 164 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RETSATQ6NUM9 610 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 CYP4V2Q6ZWL3 525 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 USP30Q70CQ3 517 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 DSG4Q86SJ6 1040 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 CNGA4Q8IV77 575 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RGL4Q8IZJ4 473 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RTL3Q8N8U3 475 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms