RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 KRT86O43790 486 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 CD160O95971 181 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 HLA-EP13747 358 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 HOXB2P14652 356 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 ETFBP38117 255 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 CSTF1Q05048 431 aaKnown RBP20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 TCF15Q12870 199 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 FNDC3BQ53EP0 1204 aaKnown RBP20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 ANKRD20A8PQ5CZ79 823 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 CAMKK1Q8N5S9 505 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 PRSS33Q8NF86 280 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 KRT35Q92764 455 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 CALN1Q9BXU9 219 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 SLC39A8Q9C0K1 460 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 DDX56Q9NY93 547 aaKnown RBP20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 HS3ST2Q9Y278 367 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 CAPN6Q9Y6Q1 641 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 MYO15AQ9UKN7 3530 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 MUC6Q6W4X9 2439 aa20.47■□□□□ 0.87
SUPT4H1-202ENST00000577396 CXorf51AA0A1B0GTR3 108 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 ZNF487B1APH4 448 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 RASA4BC9J798 803 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 RASA4O43374 803 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 KDELR3O43731 214 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 PALMO75781 387 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 TNNT1P13805 278 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 ARF5P84085 180 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 CCDC173Q0VFZ6 552 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 SERINC3Q13530 473 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 ZNF528Q3MIS6 628 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 PARP15Q460N3 678 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 IL31Q6EBC2 164 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 NT5DC3Q86UY8 548 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 VSIG1Q86XK7 387 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 ZNF366Q8N895 744 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 FRS2Q8WU20 508 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 HMCESQ96FZ2 354 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 GUCA1BQ9UMX6 200 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 PCDHA3Q9Y5H8 950 aa20.46■□□□□ 0.87
SUPT4H1-202ENST00000577396 LRRD1A4D1F6 860 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 TTC34A8MYJ7 566 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 CBX4O00257 560 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 ATP9BO43861 1147 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 SP9P0CG40 484 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 MARCKSL1P49006 195 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 PEX5P50542 639 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 ST8SIA6P61647 398 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 SLC20A2Q08357 652 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 DMWDQ09019 674 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 CAMK2GQ13555 558 aaPredicted RBP20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 TAZQ16635 292 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 LINGO4Q6UY18 593 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 RASSF3Q86WH2 238 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 TP53INP2Q8IXH6 220 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 SH2D3CQ8N5H7 860 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 LZTR1Q8N653 840 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 PQLC3Q8N755 202 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 CELF6Q96J87 481 aaKnown RBP20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 RNF157Q96PX1 679 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 HHIPQ96QV1 700 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 KCNH6Q9H252 994 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 MTG2Q9H4K7 406 aa20.45■□□□□ 0.87
SUPT4H1-202ENST00000577396 USP34Q70CQ2 3546 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 K7ERQ8 282 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 EPHX1P07099 455 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 C7P10643 843 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 CTNNA1P35221 906 aaKnown RBP20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 HNRNPA1L2Q32P51 320 aaKnown RBP20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 TMCO3Q6UWJ1 677 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 KATNAL2Q8IYT4 538 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 NETO2Q8NC67 525 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 PTPRN2Q92932 1015 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 RNF25Q96BH1 459 aaPredicted RBP20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 LZTFL1Q9NQ48 299 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 PRSS16Q9NQE7 514 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 EBF1Q9UH73 591 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 SUN2Q9UH99 717 aa20.45■□□□□ 0.86
SUPT4H1-202ENST00000577396 CKAP5Q14008 2032 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 SMAD6O43541 496 aaKnown RBP20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 SRCP12931 536 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 CTNNA2P26232 953 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 NNMTP40261 264 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 PAPOLAP51003 745 aaKnown RBP20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 ZFYVE27Q5T4F4 411 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 C9orf64Q5T6V5 341 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 RETSATQ6NUM9 610 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 MFSD7Q6UXD7 560 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 SYCE1Q8N0S2 351 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 TSTD1Q8NFU3 115 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 POLMQ9NP87 494 aaPredicted RBP20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 SLC25A13Q9UJS0 675 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 ACTL7AQ9Y615 435 aa20.44■□□□□ 0.86
SUPT4H1-202ENST00000577396 CCDC163A0A0D9SF12 145 aa20.43■□□□□ 0.86
SUPT4H1-202ENST00000577396 H0Y858 1186 aa20.43■□□□□ 0.86
SUPT4H1-202ENST00000577396 ZNF821O75541 412 aaPredicted RBP20.43■□□□□ 0.86
SUPT4H1-202ENST00000577396 APBB3O95704 486 aa20.43■□□□□ 0.86
SUPT4H1-202ENST00000577396 KRT1P04264 644 aa20.43■□□□□ 0.86
SUPT4H1-202ENST00000577396 CDKN2BP42772 138 aa20.43■□□□□ 0.86
SUPT4H1-202ENST00000577396 PXNP49023 591 aaPredicted RBP20.43■□□□□ 0.86
SUPT4H1-202ENST00000577396 COPAP53621 1224 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms