RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PCDHB2Q9Y5E7 798 aa5.35□□□□□ -1.55
CDC27-215ENST00000573550 MYH3P11055 1940 aa5.35□□□□□ -1.55
CDC27-215ENST00000573550 MAP3K15Q6ZN16 1313 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 FCHO1O14526 889 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 HNRNPDLO14979 420 aaKnown RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 CTIFO43310 598 aaKnown RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 PFKFB2O60825 505 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 ZFYP08048 801 aaPredicted RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 JAK3P52333 1124 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 WDR5P61964 334 aaKnown RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 KLF9Q13886 244 aaPredicted RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 MCMDC2Q4G0Z9 681 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 PLA2G4DQ86XP0 818 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 LRRC59Q96AG4 307 aaKnown RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 NEK1Q96PY6 1258 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 FAM118BQ9BPY3 351 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 TNMDQ9H2S6 317 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 NRIP3Q9NQ35 241 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 FSCN3Q9NQT6 498 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 ABHD10Q9NUJ1 306 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 DBNLQ9UJU6 430 aaKnown RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 CA14Q9ULX7 337 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 PA2G4Q9UQ80 394 aaKnown RBP5.34□□□□□ -1.55
CDC27-215ENST00000573550 CEP83Q9Y592 693 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 DOCK2Q92608 1830 aa5.34□□□□□ -1.55
CDC27-215ENST00000573550 STRCP1A6NGW2 1772 aa5.34□□□□□ -1.56
CDC27-215ENST00000573550 LAMB2P55268 1798 aa5.34□□□□□ -1.56
CDC27-215ENST00000573550 C4AP0C0L4 1744 aa5.34□□□□□ -1.56
CDC27-215ENST00000573550 C4BP0C0L5 1744 aa5.34□□□□□ -1.56
CDC27-215ENST00000573550 NWD2Q9ULI1 1742 aa5.34□□□□□ -1.56
CDC27-215ENST00000573550 ZMYM6O95789 1325 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 PCDH11XQ9BZA7 1347 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 PCDH11YQ9BZA8 1340 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 WNK3Q9BYP7 1800 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 GOLGA6L4A6NEF3 574 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 E5RJQ4 531 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 KIF2AO00139 706 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 PCDH17O14917 1159 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 RNF8O76064 485 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 ATP5F1P24539 256 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 SERPINB3P29508 390 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 IL15P40933 162 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 BFSP2Q13515 415 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 KPNB1Q14974 876 aaKnown RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 STX1AQ16623 288 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 SYCP2LQ5T4T6 812 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 ARL6IP4Q66PJ3 421 aaKnown RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 CCDC144NLQ6NUI1 221 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 ZNF589Q86UQ0 364 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 SMAP1Q8IYB5 467 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 TTC5Q8N0Z6 440 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 IGFBPL1Q8WX77 278 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 OVCA2Q8WZ82 227 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 ZNF274Q96GC6 653 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 ZNF396Q96N95 335 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 BPIFA3Q9BQP9 254 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 CCDC94Q9BW85 323 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 ADGRE3Q9BY15 652 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 RNF26Q9BY78 433 aaPredicted RBP5.33□□□□□ -1.56
CDC27-215ENST00000573550 SLC39A10Q9ULF5 831 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 VPS4AQ9UN37 437 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 TOGARAM1Q9Y4F4 1720 aa5.33□□□□□ -1.56
CDC27-215ENST00000573550 ECM29Q5VYK3 1845 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 XIRP1Q702N8 1843 aaKnown RBP5.32□□□□□ -1.56
CDC27-215ENST00000573550 NID2Q14112 1375 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 RREB1Q92766 1687 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 CCDC187A0A096LP49 1063 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 GXYLT2A0PJZ3 443 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 C16orf96A6NNT2 1141 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 KCNU1A8MYU2 1149 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 ERVV-2B6SEH9 535 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 J3KTA2 159 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 M0QZQ0 153 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 DSCR3O14972 297 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 TP73O15350 636 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 DHX16O60231 1041 aaKnown RBP5.32□□□□□ -1.56
CDC27-215ENST00000573550 TOP3BO95985 862 aaKnown RBP5.32□□□□□ -1.56
CDC27-215ENST00000573550 SRGAP2BP0DMP2 458 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 ALADP13716 330 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 MATN1P21941 496 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 DUSP1P28562 367 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 THBS4P35443 961 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 PPM1AP35813 382 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 IGHMBP2P38935 993 aaKnown RBP5.32□□□□□ -1.56
CDC27-215ENST00000573550 ZNF81P51508 661 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 ZNF75DP51815 510 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 CFHR1Q03591 330 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 BTKQ06187 659 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 SEMA3BQ13214 749 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 MSANTD2Q6P1R3 559 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 RASGRP3Q8IV61 690 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 CNGA4Q8IV77 575 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 CCDC191Q8NCU4 936 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 IPO4Q8TEX9 1081 aaKnown RBP5.32□□□□□ -1.56
CDC27-215ENST00000573550 TTLL2Q9BWV7 592 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 KRTAP17-1Q9BYP8 105 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 SLC29A3Q9BZD2 475 aa5.32□□□□□ -1.56
CDC27-215ENST00000573550 NAT10Q9H0A0 1025 aaKnown RBP5.32□□□□□ -1.56
CDC27-215ENST00000573550 DACT1Q9NYF0 836 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms