RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SETQ01105 290 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 BFSP2Q13515 415 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 KPNB1Q14974 876 aaKnown RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 RAB30Q15771 203 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 MAPKAPK3Q16644 382 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 C1orf141Q5JVX7 400 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 CST9Q5W186 159 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 SULT6B1Q6IMI4 303 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 C11orf87Q6NUJ2 197 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 VSTM1Q6UX27 236 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 TFAP2DQ7Z6R9 452 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 KRT73Q86Y46 540 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 PPHLN1Q8NEY8 458 aaKnown RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 DEPTORQ8TB45 409 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 GRAMD1AQ96CP6 724 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 MPP4Q96JB8 637 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 CINPQ9BW66 212 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 ADGRE3Q9BY15 652 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 EIF2AQ9BY44 585 aaKnown RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 SPRTNQ9H040 489 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 AGO4Q9HCK5 861 aaKnown RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 ABHD10Q9NUJ1 306 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 HACL1Q9UJ83 578 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 CDC23Q9UJX2 597 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 GPR52Q9Y2T5 361 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 THSD7BQ9C0I4 1608 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 NUP98P52948 1817 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 SIPA1L3O60292 1781 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCDC187A0A096LP49 1063 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 hCG_1642624A0A1W2PR95 340 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 PRSS47A8MTI9 375 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 ADAM10O14672 748 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 PLA2G6O60733 806 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 VIPP01282 170 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 HSP90AB1P08238 724 aaKnown RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 SRGAP2BP0DMP2 458 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 IDEP14735 1019 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 HOXD9P28356 352 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 THBS4P35443 961 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCT5P48643 541 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 JAK3P52333 1124 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 MAP2K1Q02750 393 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 NSUN2Q08J23 767 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 PUM3Q15397 648 aaKnown RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 CC2D1BQ5T0F9 858 aaKnown RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 TMEM63BQ5T3F8 832 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 JAKMIP3Q5VZ66 844 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCDC144NLQ6NUI1 221 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 MSANTD2Q6P1R3 559 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 FBXO38Q6PIJ6 1188 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 IPO4Q8TEX9 1081 aaKnown RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCT6BQ92526 530 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 RPL36ALQ969Q0 106 aaKnown RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 HIC2Q96JB3 615 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 FAM118BQ9BPY3 351 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 EIF2AK1Q9BQI3 630 aaKnown RBP3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 TM2D2Q9BX73 214 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 STK33Q9BYT3 514 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 RXFP3Q9NSD7 469 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 IGSF9Q9P2J2 1179 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 PGAP2Q9UHJ9 254 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 DTNAQ9Y4J8 743 aa3.78□□□□□ -1.8
HMGB1P6-201ENST00000569046 LAMB2P55268 1798 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 DYTNA2CJ06 578 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 J3KTA2 159 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 PRYO14603 147 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 PCDH17O14917 1159 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 DSCR3O14972 297 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 RNMTO43148 476 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 CTIFO43310 598 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 TAF5LO75529 589 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 RNASEH2AO75792 299 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 HSP90AA1P07900 732 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 TNFAIP3P21580 790 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 IDUAP35475 653 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 IGHMBP2P38935 993 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 GRK6P43250 576 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 CFHR1Q03591 330 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 BTKQ06187 659 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 HNRNPA0Q13151 305 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 SEMA3BQ13214 749 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 KCTD2Q14681 263 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 PAPD7Q5XG87 772 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 TLDC1Q6P9B6 456 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 C16orf89Q6UX73 402 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 KYAT3Q6YP21 454 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 CNBD1Q8NA66 436 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 SPATA5Q8NB90 893 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 IL17REQ8NFR9 667 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 WIPF2Q8TF74 440 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 SCARB1Q8WTV0 552 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 SMG7Q92540 1137 aaKnown RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 SKA1Q96BD8 255 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 MCRS1Q96EZ8 462 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 GATA5Q9BWX5 397 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 GLIS2Q9BZE0 524 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 NUAK2Q9H093 628 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 VPS16Q9H269 839 aa3.77□□□□□ -1.81
HMGB1P6-201ENST00000569046 EPS8L2Q9H6S3 715 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms