RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 KHNYNO15037 678 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 ADH1BP00325 375 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 MT-CO1P00395 513 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 SRCP12931 536 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 C5AR1P21730 350 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 OR1E1P30953 314 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 ACSL1P33121 698 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 GGCXP38435 758 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 NNMTP40261 264 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 STK19P49842 368 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 KRT83P78385 493 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 IRX4P78413 519 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 GNA12Q03113 381 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 SFSWAPQ12872 951 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 MAPK8IP2Q13387 824 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 ELAVL3Q14576 367 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 CST6Q15828 149 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 CDO1Q16878 200 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 KIAA1324Q6UXG2 1013 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 NIPA2Q8N8Q9 360 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 ISG20Q96AZ6 181 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 TRIM11Q96F44 468 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 MCEEQ96PE7 176 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 DNAJC7Q99615 494 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 NCAPGQ9BPX3 1015 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 C2orf49Q9BVC5 232 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 CEP44Q9C0F1 390 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 MAGEH1Q9H213 219 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 KDM4CQ9H3R0 1056 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 TSPY26PQ9H489 355 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 MTG2Q9H4K7 406 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 NOL6Q9H6R4 1146 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 ARHGAP20Q9P2F6 1191 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 VPS51Q9UID3 782 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 FZD4Q9ULV1 537 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 TPX2Q9ULW0 747 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 SHROOM3Q8TF72 1996 aa8.39□□□□□ -1.07
HDGFL3-205ENST00000568129 A0A087X0T9 212 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ANKRD62A6NC57 917 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 PATE3B3GLJ2 98 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SLC7A4O43246 635 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SNAP91O60641 907 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 RNASEH1O60930 286 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SRGAP2O75044 1071 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 NDUFS2O75306 463 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 GJB3O75712 270 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 DNTTP04053 509 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 CYP1A2P05177 515 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 RHOCP08134 193 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 FAM228BP0C875 321 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ACADMP11310 421 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 GOT1P17174 413 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 DRD3P35462 400 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 PCK1P35558 622 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ETFBP38117 255 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 HCAR3P49019 387 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ZNF135P52742 658 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 GALCP54803 685 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ARF5P84085 180 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 TBX2Q13207 712 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 TRIM14Q14142 442 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 DLG2Q15700 870 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 CCDC6Q16204 474 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 WDR45BQ5MNZ6 344 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SYCP2LQ5T4T6 812 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ERMARDQ5T6L9 678 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 STPG1Q5TH74 334 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SPECC1LQ69YQ0 1117 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 TCEAL6Q6IPX3 200 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 DCUN1D2Q6PH85 259 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SARM1Q6SZW1 724 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 TMC6Q7Z403 805 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 UMODL1-AS1Q8N2C9 162 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 STK40Q8N2I9 435 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 AADATQ8N5Z0 425 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 C12orf50Q8NA57 414 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 TMIEQ8NEW7 156 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 PIGKQ92643 395 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ARHGEF2Q92974 986 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 TCEAL3Q969E4 200 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 TBC1D31Q96DN5 1066 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 HSPA12BQ96MM6 686 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 GPR174Q9BXC1 333 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 BTBD1Q9H0C5 482 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 NEUROG2Q9H2A3 272 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 MRPL47Q9HD33 250 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SEPT11Q9NVA2 429 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 CNOT8Q9UFF9 292 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SLC25A13Q9UJS0 675 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 VPS28Q9UK41 221 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 CDV3Q9UKY7 258 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SLC6A14Q9UN76 642 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 SCINQ9Y6U3 715 aa8.38□□□□□ -1.07
HDGFL3-205ENST00000568129 A0A1B0GTW7 788 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SSU72P8A0A1W2PR75 194 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 FAM170AA1A519 330 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 TMCO5BA8MYB1 307 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms