RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 RALGDSQ12967 914 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 CATSPER1Q8NEC5 780 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 MCPH1Q8NEM0 835 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 COG8Q96MW5 612 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 EXTL3O43909 919 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 HSPA4LO95757 839 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 KRT19P08727 400 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 ACAT1P24752 427 aaKnown RBP16.59■□□□□ 0.25
LINC00554-201ENST00000564841 NR1D2Q14995 579 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 ZNF829Q3KNS6 432 aaPredicted RBP16.59■□□□□ 0.25
LINC00554-201ENST00000564841 PTPN20Q4JDL3 420 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 METTL21CQ5VZV1 264 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 EPGNQ6UW88 154 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 SAMD3Q8N6K7 520 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 BORCS5Q969J3 196 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 PEBP4Q96S96 227 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 SERPINI1Q99574 410 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 CXorf21Q9HAI6 301 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 ZFYVE28Q9HCC9 887 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 TCF7L2Q9NQB0 619 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 CAPN15O75808 1086 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 METTL18O95568 372 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 ATP5BP06576 529 aaKnown RBP16.59■□□□□ 0.25
LINC00554-201ENST00000564841 ME2P23368 584 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 MPSTP25325 297 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 YAP1P46937 504 aaKnown RBP16.59■□□□□ 0.25
LINC00554-201ENST00000564841 TXNL4AP83876 142 aaKnown RBP16.59■□□□□ 0.25
LINC00554-201ENST00000564841 NXNQ6DKJ4 435 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 SIGLEC10Q96LC7 697 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 PCYT2Q99447 389 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 COPG2Q9UBF2 871 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 TMED5Q9Y3A6 229 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 ACOT8O14734 319 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 SPAG6O75602 509 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 GRAP2O75791 330 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 CNMDO75829 334 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 KCNH1O95259 989 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 HDCP19113 662 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 CDH6P55285 790 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 TRAF2Q12933 501 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 CDO1Q16878 200 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 UTS2BQ765I0 119 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 PQLC3Q8N755 202 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 SPATA33Q96N06 139 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 FERMT1Q9BQL6 677 aa16.59■□□□□ 0.25
LINC00554-201ENST00000564841 SBF1O95248 1867 aa16.58■□□□□ 0.25
LINC00554-201ENST00000564841 MYO18AQ92614 2054 aaKnown RBP16.58■□□□□ 0.25
LINC00554-201ENST00000564841 WDR27A2RRH5 827 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 FAM159BA6NKW6 160 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 LDHAP00338 332 aaKnown RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 CPA3P15088 417 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 LSM12Q3MHD2 195 aaKnown RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 DENND1BQ6P3S1 775 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 TMEM174Q8WUU8 243 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 SNX27Q96L92 541 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 ZNF597Q96LX8 424 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 AGAP3Q96P47 875 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 CLK4Q9HAZ1 481 aaKnown RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 GPC6Q9Y625 555 aaPredicted RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 C1orf232A0A0U1RR37 186 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 SAC3D1A6NKF1 404 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 SOCS2O14508 198 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 HTRA2O43464 458 aaPredicted RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 LTFP02788 710 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 ERBB2P04626 1255 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 CALB1P05937 261 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 TXNP10599 105 aaKnown RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 CA8P35219 290 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 MLLT10P55197 1068 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 DLG2Q15700 870 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 FSCBQ5H9T9 825 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 ZNF534Q76KX8 674 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 SPNS2Q8IVW8 549 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 ZC3H7AQ8IWR0 971 aaKnown RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 PPWD1Q96BP3 646 aaKnown RBP16.58■□□□□ 0.24
LINC00554-201ENST00000564841 ST6GALNAC4Q9H4F1 302 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 RNF19AQ9NV58 838 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 MKS1Q9NXB0 559 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 AP4S1Q9Y587 144 aa16.58■□□□□ 0.24
LINC00554-201ENST00000564841 FAM149AA5PLN7 773 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 A6NL46 340 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 TIPRLO75663 272 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 CLCN2P51788 898 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 HMBOX1Q6NT76 420 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 ZFP1Q6P2D0 407 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 USP37Q86T82 979 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 APBA2Q99767 749 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 CDH19Q9H159 772 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 HIPK3Q9H422 1215 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 SIAEQ9HAT2 523 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 PNPLA3Q9NST1 481 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 DUS2Q9NX74 493 aaKnown RBP16.57■□□□□ 0.24
LINC00554-201ENST00000564841 RGSL1A5PLK6 1076 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.57■□□□□ 0.24
LINC00554-201ENST00000564841 CHADO15335 359 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 BCAS2O75934 225 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms