RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 ERBB2P04626 1255 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 CTSLP07711 333 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 GLI1P08151 1106 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 HNF1BP35680 557 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 CDK17Q00537 523 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 TARDBPQ13148 414 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDH11-210ENST00000564770 DLG2Q15700 870 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 PTPN20Q4JDL3 420 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 PIP5KL1Q5T9C9 394 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 ENOSF1Q7L5Y1 443 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 OXR1Q8N573 874 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 PIP4K2CQ8TBX8 421 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 SHC3Q92529 594 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 PPP1R13BQ96KQ4 1090 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 PSMB7Q99436 277 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 MYOCQ99972 504 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 KDM4CQ9H3R0 1056 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 VPS28Q9UK41 221 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 PPM1HQ9ULR3 514 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 ASXL3Q9C0F0 2248 aa16.34■□□□□ 0.21
CDH11-210ENST00000564770 CHD5Q8TDI0 1954 aa16.33■□□□□ 0.21
CDH11-210ENST00000564770 MCF2LO15068 1137 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 CNTN5O94779 1100 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 MT-CO1P00395 513 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 PNMA6AP0CW24 399 aaPredicted RBP16.33■□□□□ 0.2
CDH11-210ENST00000564770 SLC2A3P11169 496 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 SRCP12931 536 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 JUPP14923 745 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 TFE3P19532 575 aaPredicted RBP16.33■□□□□ 0.2
CDH11-210ENST00000564770 ITPKBP27987 946 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 USP8P40818 1118 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 ABCG1P45844 678 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 NME3Q13232 169 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 PROX2Q3B8N5 592 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 ACCSLQ4AC99 568 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 ALFQ53S48 1182 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 SLC45A4Q5BKX6 768 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 C6orf118Q5T5N4 469 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 DSG4Q86SJ6 1040 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 PRPF39Q86UA1 669 aaKnown RBP16.33■□□□□ 0.2
CDH11-210ENST00000564770 TMEM145Q8NBT3 493 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 RNF34Q969K3 372 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 SLC12A6Q9UHW9 1150 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 PCDHGC3Q9UN70 934 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 DMTF1Q9Y222 760 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 TBC1D30Q9Y2I9 924 aa16.33■□□□□ 0.2
CDH11-210ENST00000564770 C1QTNF3-AMACRE9PGA6 284 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 ALOX15BO15296 676 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 BNIP3LO60238 219 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 SNAP91O60641 907 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 C1SP09871 688 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 PRLRP16471 622 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 SEMG2Q02383 582 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 C5orf22Q49AR2 442 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 EFHC1Q5JVL4 640 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 ARTNQ5T4W7 220 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 FAM46CQ5VWP2 391 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 OR6B2Q6IFH4 312 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 SLC26A9Q7LBE3 791 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
CDH11-210ENST00000564770 IQCHQ86VS3 1027 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 IRF2BP1Q8IU81 584 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 ZNF683Q8IZ20 524 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 TRPM6Q9BX84 2022 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 SIX2Q9NPC8 291 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 FZD3Q9NPG1 666 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 PLCB1Q9NQ66 1216 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 PIGVQ9NUD9 493 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 HS3ST2Q9Y278 367 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 SNX10Q9Y5X0 201 aa16.32■□□□□ 0.2
CDH11-210ENST00000564770 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.31■□□□□ 0.2
CDH11-210ENST00000564770 K7ERQ8 282 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 M0QYT0 321 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 TRIM38O00635 465 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 CLDN11O75508 207 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 ADCY5O95622 1261 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 EIF2S3P41091 472 aaKnown RBP16.31■□□□□ 0.2
CDH11-210ENST00000564770 OXCT1P55809 520 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 ZNF177Q13360 481 aaPredicted RBP16.31■□□□□ 0.2
CDH11-210ENST00000564770 SETMARQ53H47 684 aaPredicted RBP16.31■□□□□ 0.2
CDH11-210ENST00000564770 C11orf57Q6ZUT1 292 aaPredicted RBP16.31■□□□□ 0.2
CDH11-210ENST00000564770 SLC47A2Q86VL8 602 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 RFFLQ8WZ73 363 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 KLK6Q92876 244 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 ARRDC3Q96B67 414 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 SIK2Q9H0K1 926 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 MUC3BQ9H195 1237 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 PREBQ9HCU5 417 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 TMPRSS4Q9NRS4 437 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 VPS51Q9UID3 782 aa16.31■□□□□ 0.2
CDH11-210ENST00000564770 FAM170AA1A519 330 aa16.3■□□□□ 0.2
CDH11-210ENST00000564770 PRAMEF26H0Y7S4 382 aa16.3■□□□□ 0.2
CDH11-210ENST00000564770 SMAD6O43541 496 aaKnown RBP16.3■□□□□ 0.2
CDH11-210ENST00000564770 SIGLEC6O43699 453 aa16.3■□□□□ 0.2
CDH11-210ENST00000564770 RNGTTO60942 597 aaKnown RBP16.3■□□□□ 0.2
CDH11-210ENST00000564770 CDK4P11802 303 aa16.3■□□□□ 0.2
CDH11-210ENST00000564770 CKMT2P17540 419 aa16.3■□□□□ 0.2
CDH11-210ENST00000564770 RRM1P23921 792 aa16.3■□□□□ 0.2
CDH11-210ENST00000564770 ACP1P24666 158 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms