RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PTGER1P34995 402 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 PPM1AP35813 382 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 IL6STP40189 918 aaPredicted RBP5.49□□□□□ -1.53
LINC00254-201ENST00000563416 VPS41P49754 854 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 RPS13P62277 151 aaKnown RBP5.49□□□□□ -1.53
LINC00254-201ENST00000563416 SEC23BQ15437 767 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 ELF2Q15723 593 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 ETFDHQ16134 617 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 ANO1Q5XXA6 986 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 GATAD2AQ86YP4 633 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 WDR60Q8WVS4 1066 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 FAR2Q96K12 515 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 VPS16Q9H269 839 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 MIS18AQ9NYP9 233 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 LRCH1Q9Y2L9 728 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 A0A1B0GUL6 1792 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 TIAM2Q8IVF5 1701 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 SLX4Q8IY92 1834 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 PXDNLA1KZ92 1463 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 CCER2I3L3R5 266 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 PIP5K1BO14986 540 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 TP73O15350 636 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 ALADP13716 330 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 NDUFS1P28331 727 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 RFC4P35249 363 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 HOXD12P35452 270 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 TRAPPC10P48553 1259 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 ID2Q02363 134 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 KLF9Q13886 244 aaPredicted RBP5.48□□□□□ -1.53
LINC00254-201ENST00000563416 TRIM71Q2Q1W2 868 aaKnown RBP5.48□□□□□ -1.53
LINC00254-201ENST00000563416 SLC9C1Q4G0N8 1177 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 ZNF425Q6IV72 752 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 XRRA1Q6P2D8 792 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 NRSN1Q8IZ57 195 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 IPO4Q8TEX9 1081 aaKnown RBP5.48□□□□□ -1.53
LINC00254-201ENST00000563416 PIGKQ92643 395 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 FCRL5Q96RD9 977 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 PRPF18Q99633 342 aaKnown RBP5.48□□□□□ -1.53
LINC00254-201ENST00000563416 PAAF1Q9BRP4 392 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 HERPUD2Q9BSE4 406 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 TTLL2Q9BWV7 592 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.48□□□□□ -1.53
LINC00254-201ENST00000563416 TRIM2Q9C040 744 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 CDCP1Q9H5V8 836 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 ASNSD1Q9NWL6 643 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 TRNAU1APQ9NX07 287 aaKnown RBP5.48□□□□□ -1.53
LINC00254-201ENST00000563416 NARFQ9UHQ1 456 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 TSPYL4Q9UJ04 414 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 NFU1Q9UMS0 254 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 USP16Q9Y5T5 823 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 IL16Q14005 1332 aa5.48□□□□□ -1.53
LINC00254-201ENST00000563416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.47□□□□□ -1.53
LINC00254-201ENST00000563416 GXYLT2A0PJZ3 443 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 GOLGA6L3A6NEY3 463 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 PCDH17O14917 1159 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 FFAR2O15552 330 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 DHHO43323 396 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 TOP3BO95985 862 aaKnown RBP5.47□□□□□ -1.53
LINC00254-201ENST00000563416 PLAUP00749 431 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 FGBP02675 491 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 ANXA6P08133 673 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 ITGA5P08648 1049 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 SETSIPP0DME0 302 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 NPPBP16860 134 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 SERPINB3P29508 390 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 SLC12A2P55011 1212 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 YPEL5P62699 121 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 ZNF91Q05481 1191 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 CALD1Q05682 793 aaKnown RBP5.47□□□□□ -1.53
LINC00254-201ENST00000563416 STIM1Q13586 685 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 Q4G0T1 1027 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 C11orf87Q6NUJ2 197 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 MSANTD2Q6P1R3 559 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 PGBD2Q6P3X8 592 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 DEF8Q6ZN54 512 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 UBE2Q1Q7Z7E8 422 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 MRPL10Q7Z7H8 261 aaKnown RBP5.47□□□□□ -1.53
LINC00254-201ENST00000563416 SMAP1Q8IYB5 467 aaPredicted RBP5.47□□□□□ -1.53
LINC00254-201ENST00000563416 CPXCR1Q8N123 301 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 NGEFQ8N5V2 710 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 PAF1Q8N7H5 531 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 ANKRD42Q8N9B4 389 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 C18orf8Q96DM3 657 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 P2RY11Q96G91 374 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 SIGLEC11Q96RL6 698 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 TMEM79Q9BSE2 394 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 SYT17Q9BSW7 474 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 EPS8L2Q9H6S3 715 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 SRP68Q9UHB9 627 aaKnown RBP5.47□□□□□ -1.53
LINC00254-201ENST00000563416 CDC23Q9UJX2 597 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 PCDHB7Q9Y5E2 793 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 LRRC37AA6NMS7 1700 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 ATP10DQ9P241 1426 aa5.47□□□□□ -1.53
LINC00254-201ENST00000563416 PRYO14603 147 aa5.46□□□□□ -1.54
LINC00254-201ENST00000563416 PPEF2O14830 753 aa5.46□□□□□ -1.54
LINC00254-201ENST00000563416 MOSPD3O75425 235 aa5.46□□□□□ -1.54
LINC00254-201ENST00000563416 TAF5LO75529 589 aa5.46□□□□□ -1.54
LINC00254-201ENST00000563416 CAMTA2O94983 1202 aa5.46□□□□□ -1.54
LINC00254-201ENST00000563416 ENO1P06733 434 aaKnown RBP5.46□□□□□ -1.54
LINC00254-201ENST00000563416 CENPBP07199 599 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms