RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CNTN5O94779 1100 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 MT-CO1P00395 513 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 CTSLP07711 333 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 JUPP14923 745 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 TARDBPQ13148 414 aaKnown RBP eCLIP17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 NME3Q13232 169 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 C5orf22Q49AR2 442 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 SLC45A4Q5BKX6 768 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 EFHC1Q5JVL4 640 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 HES3Q5TGS1 186 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 TRIM69Q86WT6 500 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 SH2D3CQ8N5H7 860 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 C1orf131Q8NDD1 294 aaKnown RBP17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 PIP4K2CQ8TBX8 421 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 PSMB7Q99436 277 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 APEX2Q9UBZ4 518 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 SLC25A13Q9UJS0 675 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 DAB1O75553 588 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 TFE3P19532 575 aaPredicted RBP17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 OXCT1P55809 520 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 ZNF177Q13360 481 aaPredicted RBP17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 PTPN20Q4JDL3 420 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 PIP5KL1Q5T9C9 394 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 FAM46CQ5VWP2 391 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 OR6B2Q6IFH4 312 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 DSG4Q86SJ6 1040 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 IQCHQ86VS3 1027 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 IRF2BP1Q8IU81 584 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 ZNF683Q8IZ20 524 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 OXR1Q8N573 874 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 DCBLD2Q96PD2 775 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 SIX2Q9NPC8 291 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 VPS28Q9UK41 221 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 DMTF1Q9Y222 760 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 TBC1D30Q9Y2I9 924 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 SNX10Q9Y5X0 201 aa17.25■□□□□ 0.35
HDGFL3-203ENST00000563404 K7ERQ8 282 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 TRIM38O00635 465 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 ALOX15BO15296 676 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 BNIP3LO60238 219 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 SNAP91O60641 907 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 SDC3O75056 442 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 CLDN11O75508 207 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 ADCY5O95622 1261 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 PNMA6AP0CW24 399 aaPredicted RBP17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 SRCP12931 536 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 PON1P27169 355 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 ITPKBP27987 946 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 CLCN1P35523 988 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 HNF1BP35680 557 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 SLC6A3Q01959 620 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 ALFQ53S48 1182 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 ARTNQ5T4W7 220 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 ARRDC3Q96B67 414 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 NXPE2Q96DL1 559 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 FAM81BQ96LP2 452 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 SIK2Q9H0K1 926 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 PLCB1Q9NQ66 1216 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 PIGVQ9NUD9 493 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 RWDD2AQ9UIY3 292 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 ASXL3Q9C0F0 2248 aa17.24■□□□□ 0.35
HDGFL3-203ENST00000563404 C1QTNF3-AMACRE9PGA6 284 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 M0QYT0 321 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 RNGTTO60942 597 aaKnown RBP17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 FGFR1OPO95684 399 aaKnown RBP17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 CDK4P11802 303 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 ZNF18P17022 549 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 CKMT2P17540 419 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 NOS2P35228 1153 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 NUDT1P36639 197 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 CDH4P55283 916 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 SEMG2Q02383 582 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 STAT4Q14765 748 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 EXOC3L4Q17RC7 722 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 PROX2Q3B8N5 592 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 C6orf118Q5T5N4 469 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 SLC26A9Q7LBE3 791 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 SLC47A2Q86VL8 602 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 CREBRFQ8IUR6 639 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 SLC25A45Q8N413 288 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 TMEM145Q8NBT3 493 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 ZNF397Q8NF99 534 aaPredicted RBP17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 OR2A12Q8NGT7 310 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 KLK6Q92876 244 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 NPY6RQ99463 290 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 MYOCQ99972 504 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 PREBQ9HCU5 417 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 TMPRSS4Q9NRS4 437 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 ARHGEF38Q9NXL2 777 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 HS3ST2Q9Y278 367 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 MYLKQ15746 1914 aa17.23■□□□□ 0.35
HDGFL3-203ENST00000563404 GCN1Q92616 2671 aaKnown RBP17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 PRAMEF26H0Y7S4 382 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 FOXN3O00409 490 aaPredicted RBP17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 SMAD6O43541 496 aaKnown RBP17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 PRLRP16471 622 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms