RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PTPRN2Q92932 1015 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 EPAS1Q99814 870 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 THAP2Q9H0W7 228 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 ABHD10Q9NUJ1 306 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 GPATCH2LQ9NWQ4 482 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 WSB2Q9NYS7 404 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 PCSK1NQ9UHG2 260 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 CDV3Q9UKY7 258 aaKnown RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 AP4E1Q9UPM8 1137 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 NEU3Q9UQ49 428 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 SHROOM3Q8TF72 1996 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-206ENST00000562610 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 PATE3B3GLJ2 98 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 MID1O15344 667 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 IGLV3-19P01714 112 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 SRCP12931 536 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 GLDCP23378 1020 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 EPHB2P29323 1055 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 HNRNPH3P31942 346 aaKnown RBP16.52■□□□□ 0.24
COMMD4-206ENST00000562610 L1CAMP32004 1257 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 DPP6P42658 865 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 ARHGAP8P85298 464 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 DLG2Q15700 870 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 IL31Q6EBC2 164 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 NLRP14Q86W24 1093 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 SYT12Q8IV01 421 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 OR8K1Q8NGG5 319 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 FNIP1Q8TF40 1166 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 FRS2Q8WU20 508 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 FOXJ1Q92949 421 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 DNAJC7Q99615 494 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 PABPC3Q9H361 631 aaKnown RBP16.52■□□□□ 0.24
COMMD4-206ENST00000562610 DHX35Q9H5Z1 703 aaKnown RBP16.52■□□□□ 0.24
COMMD4-206ENST00000562610 NDFIP2Q9NV92 336 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 TMEM248Q9NWD8 314 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 HS3ST2Q9Y278 367 aa16.52■□□□□ 0.24
COMMD4-206ENST00000562610 ANKRD36A6QL64 1941 aa16.52■□□□□ 0.23
COMMD4-206ENST00000562610 PCDH15Q96QU1 1955 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 TMEM131Q92545 1883 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 ATP9BO43861 1147 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 PRPSAP2O60256 369 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 GDF9O60383 454 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 ADH1BP00325 375 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 IL1BP01584 269 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 CFIP05156 583 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 ETFBP38117 255 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 ID4P47928 161 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-206ENST00000562610 ADKP55263 362 aaKnown RBP16.51■□□□□ 0.23
COMMD4-206ENST00000562610 TPI1P60174 286 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 GFPT1Q06210 699 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-206ENST00000562610 RSPO4Q2I0M5 234 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-206ENST00000562610 SYCP2LQ5T4T6 812 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 DAB2IPQ5VWQ8 1189 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 C22orf39Q6P5X5 142 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 SARM1Q6SZW1 724 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 ZNF354CQ86Y25 554 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 OR8D1Q8WZ84 308 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 SNX19Q92543 992 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 RMDN1Q96DB5 314 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 CCDC114Q96M63 670 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 PEBP4Q96S96 227 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 OMDQ99983 421 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 SNRNP25Q9BV90 132 aaKnown RBP16.51■□□□□ 0.23
COMMD4-206ENST00000562610 NUP85Q9BW27 656 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 BTBD1Q9H0C5 482 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 TMEM74BQ9NUR3 256 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 FBXL12Q9NXK8 326 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 ANAPC7Q9UJX3 599 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 SCML1Q9UN30 329 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 NCKAP1Q9Y2A7 1128 aa16.51■□□□□ 0.23
COMMD4-206ENST00000562610 CEP250Q9BV73 2442 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 A0A1W2PP55 124 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 K7ERQ8 282 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
COMMD4-206ENST00000562610 RAMP2O60895 175 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 LRCH4O75427 683 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 RNASEH2AO75792 299 aaKnown RBP16.5■□□□□ 0.23
COMMD4-206ENST00000562610 MT-CO1P00395 513 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 MIPP30301 263 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 ACSL1P33121 698 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 ACVRL1P37023 503 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 SFSWAPQ12872 951 aaKnown RBP16.5■□□□□ 0.23
COMMD4-206ENST00000562610 TRIM61Q5EBN2 209 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 WDR45BQ5MNZ6 344 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 DCAF12L1Q5VU92 463 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 RETSATQ6NUM9 610 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 DSG4Q86SJ6 1040 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 CNGA4Q8IV77 575 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 ARHGEF26Q96DR7 871 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 FAM129BQ96TA1 746 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 EDEM2Q9BV94 578 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 RETREG1Q9H6L5 497 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 CATSPERBQ9H7T0 1116 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 PILRBQ9UKJ0 227 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 SPTBN4Q9H254 2564 aa16.5■□□□□ 0.23
COMMD4-206ENST00000562610 LNP1A1A4G5 178 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 EEF2KO00418 725 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms