RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 NAGLUP54802 743 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 TUBA4AP68366 448 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 BNIP3Q12983 259 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 ZBED5Q49AG3 693 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 TREML2Q5T2D2 321 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 HMBOX1Q6NT76 420 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 TTC33Q6PID6 262 aaPredicted RBP16.79■□□□□ 0.28
TPM1-228ENST00000560975 LAYNQ6UX15 382 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 SLCO4A1Q96BD0 722 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 ZBTB26Q9HCK0 441 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 VPS45Q9NRW7 570 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 RAP2CQ9Y3L5 183 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 NRXN2Q9P2S2 1712 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 UGT1A6P19224 532 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 UGT1A1P22309 533 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 UGT1A4P22310 534 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 UGT1A3P35503 534 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 UGT1A5P35504 534 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 FGD3Q5JSP0 725 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 SETD3Q86TU7 594 aaPredicted RBP16.79■□□□□ 0.28
TPM1-228ENST00000560975 BORCS5Q969J3 196 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 CERS2Q96G23 380 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 FCRL3Q96P31 734 aaPredicted RBP16.79■□□□□ 0.28
TPM1-228ENST00000560975 PPP1R10Q96QC0 940 aaKnown RBP16.79■□□□□ 0.28
TPM1-228ENST00000560975 UNKQ9C0B0 810 aaKnown RBP16.79■□□□□ 0.28
TPM1-228ENST00000560975 NAA50Q9GZZ1 169 aaKnown RBP16.79■□□□□ 0.28
TPM1-228ENST00000560975 VPS33BQ9H267 617 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 PRDM16Q9HAZ2 1276 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 SLC38A10Q9HBR0 1119 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 SFMBT1Q9UHJ3 866 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 TMEM247A6NEH6 219 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 ZNF839A8K0R7 811 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 USP12O75317 370 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 BCAP31P51572 246 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 TRIM25Q14258 630 aaKnown RBP16.79■□□□□ 0.28
TPM1-228ENST00000560975 GLRA4Q5JXX5 417 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 NANOGP8Q6NSW7 305 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 CYS1Q717R9 158 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 HM13Q8TCT9 377 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 ASB9Q96DX5 294 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 ANKRD36BP1Q96IX9 119 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 WNK4Q96J92 1243 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 CORO1BQ9BR76 489 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 CXorf21Q9HAI6 301 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 A0A087WXM4 84 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 CLIC3O95833 236 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 C2P06681 752 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 NPR1P16066 1061 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 TMEM132AQ24JP5 1023 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 TMEM26Q6ZUK4 368 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 ZNF669Q96BR6 464 aaPredicted RBP16.78■□□□□ 0.28
TPM1-228ENST00000560975 GPRASP2Q96D09 838 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 SCYL1Q96KG9 808 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 GPATCH1Q9BRR8 931 aaKnown RBP16.78■□□□□ 0.28
TPM1-228ENST00000560975 TASP1Q9H6P5 420 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 DUS2Q9NX74 493 aaKnown RBP16.78■□□□□ 0.28
TPM1-228ENST00000560975 GMPR2Q9P2T1 348 aaKnown RBP16.78■□□□□ 0.28
TPM1-228ENST00000560975 PTPRFP10586 1907 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 GOLGA8TH3BQL2 631 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 AKAP10O43572 662 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 GABRB3P28472 473 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 CD300CQ08708 224 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 TMEM53Q6P2H8 277 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 CHSY3Q70JA7 882 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 LYSMD3Q7Z3D4 306 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 TBC1D15Q8TC07 691 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 HTR3CQ8WXA8 447 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 RPF2Q9H7B2 306 aaKnown RBP16.78■□□□□ 0.28
TPM1-228ENST00000560975 FAM49BQ9NUQ9 324 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 OXSMQ9NWU1 459 aa16.78■□□□□ 0.28
TPM1-228ENST00000560975 CNOT6Q9ULM6 557 aaKnown RBP16.78■□□□□ 0.28
TPM1-228ENST00000560975 H3BMQ9 156 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 OGTO15294 1046 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 POLBP06746 335 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 SUPT20HL2P0C7V6 817 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 PSMB4P28070 264 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 SDC4P31431 198 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 RHDQ02161 417 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 ZNF829Q3KNS6 432 aaPredicted RBP16.77■□□□□ 0.28
TPM1-228ENST00000560975 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 CCDC92Q53HC0 331 aaPredicted RBP16.77■□□□□ 0.28
TPM1-228ENST00000560975 AARS2Q5JTZ9 985 aaKnown RBP16.77■□□□□ 0.28
TPM1-228ENST00000560975 GRTP1Q5TC63 336 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 SLC15A3Q8IY34 581 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 TMEM192Q8IY95 271 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 URGCPQ8TCY9 931 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 TRPC4APQ8TEL6 797 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 COG8Q96MW5 612 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 RBBP8Q99708 897 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 CPNE1Q99829 537 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 ACE2Q9BYF1 805 aaPredicted RBP16.77■□□□□ 0.28
TPM1-228ENST00000560975 ANKRD60Q9BZ19 345 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 TSPYL2Q9H2G4 693 aaPredicted RBP16.77■□□□□ 0.28
TPM1-228ENST00000560975 ZNF302Q9NR11 478 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 PCDHGA7Q9Y5G6 932 aa16.77■□□□□ 0.28
TPM1-228ENST00000560975 IDO1P14902 403 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 CYP3A5P20815 502 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 SPRP35270 261 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms