RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 BNIP3Q12983 259 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 POM121L1PQ3SYA9 428 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 AGBL4Q5VU57 503 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 SMYD5Q6GMV2 418 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 Q6ZVU0 165 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 SLC26A9Q7LBE3 791 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 IQCHQ86VS3 1027 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 TRIM69Q86WT6 500 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 SPATS2Q86XZ4 545 aaKnown RBP17.88■□□□□ 0.45
CRTC3-208ENST00000560098 PIP4K2CQ8TBX8 421 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 TBC1D30Q9Y2I9 924 aa17.88■□□□□ 0.45
CRTC3-208ENST00000560098 ACACAQ13085 2346 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 TP53BP1Q12888 1972 aaPredicted RBP17.87■□□□□ 0.45
CRTC3-208ENST00000560098 A0A087WV48 116 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 M0QYT0 321 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 JUPP14923 745 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 KRT9P35527 623 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 ACADVLP49748 655 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 SLC6A3Q01959 620 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 OVGP1Q12889 678 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 STAT4Q14765 748 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 C5orf22Q49AR2 442 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 SOWAHCQ53LP3 525 aaPredicted RBP17.87■□□□□ 0.45
CRTC3-208ENST00000560098 SFMBT2Q5VUG0 894 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 C14orf80Q86SX3 495 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 SH2D3CQ8N5H7 860 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 TSC1Q92574 1164 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 LRIG1Q96JA1 1093 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 SIK2Q9H0K1 926 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 SYNCQ9H7C4 482 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 KIAA1468Q9P260 1216 aa17.87■□□□□ 0.45
CRTC3-208ENST00000560098 BNIP3LO60238 219 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 CDH4P55283 916 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 CLDN6P56747 220 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 PTPN20Q4JDL3 420 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 SETMARQ53H47 684 aaPredicted RBP17.86■□□□□ 0.45
CRTC3-208ENST00000560098 IRF2BP1Q8IU81 584 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 ZNF397Q8NF99 534 aaPredicted RBP17.86■□□□□ 0.45
CRTC3-208ENST00000560098 MUC3BQ9H195 1237 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 PREBQ9HCU5 417 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 AJAP1Q9UKB5 411 aaPredicted RBP17.86■□□□□ 0.45
CRTC3-208ENST00000560098 HS3ST2Q9Y278 367 aa17.86■□□□□ 0.45
CRTC3-208ENST00000560098 SMG1Q96Q15 3661 aaKnown RBP17.86■□□□□ 0.45
CRTC3-208ENST00000560098 PRAMEF26H0Y7S4 382 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 SRCP12931 536 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 C6orf118Q5T5N4 469 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 OTUD1Q5VV17 481 aaPredicted RBP17.85■□□□□ 0.45
CRTC3-208ENST00000560098 KANSL1Q7Z3B3 1105 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 SLC47A2Q86VL8 602 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 ZDHHC17Q8IUH5 632 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 NXPE2Q96DL1 559 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 NPY6RQ99463 290 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 TKTL2Q9H0I9 626 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 WDCPQ9H6R7 721 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 SIX2Q9NPC8 291 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 PIGVQ9NUD9 493 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 ARHGEF38Q9NXL2 777 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 RRN3Q9NYV6 651 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 DNAJC12Q9UKB3 198 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 FARP1Q9Y4F1 1045 aaPredicted RBP17.85■□□□□ 0.45
CRTC3-208ENST00000560098 GTF3C3Q9Y5Q9 886 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 IGSF10Q6WRI0 2623 aa17.85■□□□□ 0.45
CRTC3-208ENST00000560098 GOLGA4Q13439 2230 aaKnown RBP17.84■□□□□ 0.45
CRTC3-208ENST00000560098 FOXN3O00409 490 aaPredicted RBP17.84■□□□□ 0.45
CRTC3-208ENST00000560098 CNTN5O94779 1100 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 ADCY5O95622 1261 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 MT-CO1P00395 513 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 RHOCP08134 193 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 CLCN1P35523 988 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 MTIF2P46199 727 aaKnown RBP17.84■□□□□ 0.45
CRTC3-208ENST00000560098 TAS2R38P59533 333 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 KRT83P78385 493 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 TARDBPQ13148 414 aaKnown RBP eCLIP17.84■□□□□ 0.45
CRTC3-208ENST00000560098 ILKQ13418 452 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 CAMK4Q16566 473 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 ALFQ53S48 1182 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 BRMS1LQ5PSV4 323 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 HES3Q5TGS1 186 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 FBXL19Q6PCT2 694 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 ATP11CQ8NB49 1132 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 CCDC114Q96M63 670 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 PSMB7Q99436 277 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 C2orf49Q9BVC5 232 aaPredicted RBP17.84■□□□□ 0.45
CRTC3-208ENST00000560098 PLCB1Q9NQ66 1216 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 ANLNQ9NQW6 1124 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.84■□□□□ 0.45
CRTC3-208ENST00000560098 STAP1Q9ULZ2 295 aa17.84■□□□□ 0.45
CRTC3-208ENST00000560098 RNGTTO60942 597 aaKnown RBP17.83■□□□□ 0.45
CRTC3-208ENST00000560098 CTSLP07711 333 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 PNMA6AP0CW24 399 aaPredicted RBP17.83■□□□□ 0.45
CRTC3-208ENST00000560098 CKMT2P17540 419 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 CXCR3P49682 368 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 RNASE9P60153 205 aaKnown RBP17.83■□□□□ 0.45
CRTC3-208ENST00000560098 PIP5KL1Q5T9C9 394 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 NEK5Q6P3R8 708 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 KLHDC7BQ96G42 594 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 DCBLD2Q96PD2 775 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 VPS51Q9UID3 782 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 CA5BQ9Y2D0 317 aa17.83■□□□□ 0.45
CRTC3-208ENST00000560098 PAXBP1Q9Y5B6 917 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms