RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF670Q9BS34 389 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 KCNH6Q9H252 994 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 KCNF1Q9H3M0 494 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 ETNK2Q9NVF9 386 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 SUN2Q9UH99 717 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 GUCA1BQ9UMX6 200 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 DCLK1O15075 740 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 SYNCRIPO60506 623 aaKnown RBP26.14■■□□□ 1.77
SMAD6-202ENST00000557916 APBB3O95704 486 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 KRT1P04264 644 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 SP9P0CG40 484 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 NDST2P52849 883 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 ZNF528Q3MIS6 628 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 ODF2Q5BJF6 829 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 RETSATQ6NUM9 610 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 TMCO3Q6UWJ1 677 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 CELF6Q96J87 481 aaKnown RBP26.14■■□□□ 1.77
SMAD6-202ENST00000557916 KLC2Q9H0B6 622 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 HPCAL4Q9UM19 191 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 HCN4Q9Y3Q4 1203 aa26.14■■□□□ 1.77
SMAD6-202ENST00000557916 TCRBV21S2A2A0A5A6 115 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 TTC34A8MYJ7 566 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 H0Y858 1186 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 PALMO75781 387 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 ZMPSTE24O75844 475 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 ALDH1A2O94788 518 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 HOXA6P31267 233 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 VASPP50552 380 aaPredicted RBP26.13■■□□□ 1.77
SMAD6-202ENST00000557916 CCDC173Q0VFZ6 552 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 ANKRD20A8PQ5CZ79 823 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 SYCE1Q8N0S2 351 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 LZTR1Q8N653 840 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 NPWQ8N729 165 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 HMCESQ96FZ2 354 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 LRRC19Q9H756 370 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 CD248Q9HCU0 757 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 PPP2R2CQ9Y2T4 447 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.13■■□□□ 1.77
SMAD6-202ENST00000557916 MFHAS1Q9Y4C4 1052 aa26.13■■□□□ 1.77
SMAD6-202ENST00000557916 MUC22E2RYF6 1773 aaPredicted RBP26.12■■□□□ 1.77
SMAD6-202ENST00000557916 MT-CO1P00395 513 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 PXNP49023 591 aaPredicted RBP26.12■■□□□ 1.77
SMAD6-202ENST00000557916 TCF15Q12870 199 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 HNRNPA1L2Q32P51 320 aaKnown RBP26.12■■□□□ 1.77
SMAD6-202ENST00000557916 HEATR6Q6AI08 1181 aaKnown RBP26.12■■□□□ 1.77
SMAD6-202ENST00000557916 ANO7Q6IWH7 933 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 LINGO4Q6UY18 593 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 ZNF662Q6ZS27 426 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 PCDH19Q8TAB3 1148 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 SLC39A8Q9C0K1 460 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 MTG2Q9H4K7 406 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 LZTFL1Q9NQ48 299 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 HS3ST2Q9Y278 367 aa26.12■■□□□ 1.77
SMAD6-202ENST00000557916 ZBTB24O43167 697 aaPredicted RBP26.11■■□□□ 1.77
SMAD6-202ENST00000557916 KDELR3O43731 214 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 SRCP12931 536 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 NRLP54845 237 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 ARF5P84085 180 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 SLC20A2Q08357 652 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 DMWDQ09019 674 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 SERINC3Q13530 473 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 ACCSLQ4AC99 568 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 AFMIDQ63HM1 303 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 SH2D3CQ8N5H7 860 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 ATP11CQ8NB49 1132 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 HMGB4Q8WW32 186 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 RNF25Q96BH1 459 aaPredicted RBP26.11■■□□□ 1.77
SMAD6-202ENST00000557916 FAF2Q96CS3 445 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 FAM126AQ9BYI3 521 aaPredicted RBP26.11■■□□□ 1.77
SMAD6-202ENST00000557916 WDFY4Q6ZS81 3184 aa26.11■■□□□ 1.77
SMAD6-202ENST00000557916 ARHGAP42A6NI28 874 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 C3orf70A6NLC5 250 aaPredicted RBP26.1■■□□□ 1.77
SMAD6-202ENST00000557916 ATP9BO43861 1147 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 MARCKSL1P49006 195 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 CAMK2GQ13555 558 aaPredicted RBP26.1■■□□□ 1.77
SMAD6-202ENST00000557916 VSIG1Q86XK7 387 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 ARHGAP12Q8IWW6 846 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 KATNAL2Q8IYT4 538 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 NETO2Q8NC67 525 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 KRT35Q92764 455 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 PRSS16Q9NQE7 514 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 EBF1Q9UH73 591 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 AMFRQ9UKV5 643 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 CAPN6Q9Y6Q1 641 aa26.1■■□□□ 1.77
SMAD6-202ENST00000557916 EDDM13A0A1B0GTR0 161 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 CXorf51AA0A1B0GTR3 108 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 ZNF487B1APH4 448 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 K7ERQ8 282 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 DFFAO00273 331 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 CTNNA1P35221 906 aaKnown RBP26.09■■□□□ 1.77
SMAD6-202ENST00000557916 SERPINB6P35237 376 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 FNTBP49356 437 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 PAPOLAP51003 745 aaKnown RBP26.09■■□□□ 1.77
SMAD6-202ENST00000557916 PTPN5P54829 565 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 DLG2Q15700 870 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 PEX26Q7Z412 305 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 NT5DC3Q86UY8 548 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 RASSF3Q86WH2 238 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 PGBD3Q8N328 593 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 MDGA1Q8NFP4 955 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms