RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ACACAQ13085 2346 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 LOC400499M0QZD8 3231 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 MAGEC1O60732 1142 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 PAGE1O75459 146 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 CLDN11O75508 207 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 ERBB2P04626 1255 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 CKMT2P17540 419 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 TAS2R38P59533 333 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 TARDBPQ13148 414 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCFD1-224ENST00000557713 NME3Q13232 169 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 ILKQ13418 452 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 STAT4Q14765 748 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 C6orf118Q5T5N4 469 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 OR6B2Q6IFH4 312 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 OLFML1Q6UWY5 402 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 Q6ZVU0 165 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 CRELD1Q96HD1 420 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 RWDD2AQ9UIY3 292 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 VPS28Q9UK41 221 aa16.38■□□□□ 0.21
SCFD1-224ENST00000557713 URB1O60287 2271 aaKnown RBP16.38■□□□□ 0.21
SCFD1-224ENST00000557713 SMG1Q96Q15 3661 aaKnown RBP16.38■□□□□ 0.21
SCFD1-224ENST00000557713 GOLGA4Q13439 2230 aaKnown RBP16.37■□□□□ 0.21
SCFD1-224ENST00000557713 C1QTNF3-AMACRE9PGA6 284 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 PRAMEF26H0Y7S4 382 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 DAB1O75553 588 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 CNTN5O94779 1100 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 MT-CO1P00395 513 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 SRCP12931 536 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 ZNF18P17022 549 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 PON1P27169 355 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 NOS2P35228 1153 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 CDH4P55283 916 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 SLC6A3Q01959 620 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 BECN1Q14457 450 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 RTP5Q14D33 572 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 POM121L1PQ3SYA9 428 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 SETMARQ53H47 684 aaPredicted RBP16.37■□□□□ 0.21
SCFD1-224ENST00000557713 HES3Q5TGS1 186 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 OTUD1Q5VV17 481 aaPredicted RBP16.37■□□□□ 0.21
SCFD1-224ENST00000557713 SLC26A9Q7LBE3 791 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 CACTIN-AS1Q8N1I8 211 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 C1orf131Q8NDD1 294 aaKnown RBP16.37■□□□□ 0.21
SCFD1-224ENST00000557713 ZNF397Q8NF99 534 aaPredicted RBP16.37■□□□□ 0.21
SCFD1-224ENST00000557713 NXPE2Q96DL1 559 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 NOX5Q96PH1 765 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 NRSN2Q9GZP1 204 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 PREBQ9HCU5 417 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 HS3ST2Q9Y278 367 aa16.37■□□□□ 0.21
SCFD1-224ENST00000557713 FASNP49327 2511 aaKnown RBP16.36■□□□□ 0.21
SCFD1-224ENST00000557713 GTPBP10A4D1E9 387 aaKnown RBP16.36■□□□□ 0.21
SCFD1-224ENST00000557713 I6L893 689 aaPredicted RBP16.36■□□□□ 0.21
SCFD1-224ENST00000557713 M0QYT0 321 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 RNGTTO60942 597 aaKnown RBP16.36■□□□□ 0.21
SCFD1-224ENST00000557713 ADCY5O95622 1261 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 CTSLP07711 333 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 CLCN1P35523 988 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 GGCXP38435 758 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 EIF2S3P41091 472 aaKnown RBP16.36■□□□□ 0.21
SCFD1-224ENST00000557713 CXCR3P49682 368 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 PTK2Q05397 1052 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 EXOC3L4Q17RC7 722 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 PROX2Q3B8N5 592 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 PTPN20Q4JDL3 420 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 PIP5KL1Q5T9C9 394 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 ZNF683Q8IZ20 524 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 SLC25A45Q8N413 288 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 RFFLQ8WZ73 363 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 DCBLD2Q96PD2 775 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 PSMB7Q99436 277 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 NPY6RQ99463 290 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 SIK2Q9H0K1 926 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 SIX2Q9NPC8 291 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 ANLNQ9NQW6 1124 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 PIGVQ9NUD9 493 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 ARHGEF38Q9NXL2 777 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 AJAP1Q9UKB5 411 aaPredicted RBP16.36■□□□□ 0.21
SCFD1-224ENST00000557713 CA5BQ9Y2D0 317 aa16.36■□□□□ 0.21
SCFD1-224ENST00000557713 DRGXA6NNA5 263 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 FOXN3O00409 490 aaPredicted RBP16.35■□□□□ 0.21
SCFD1-224ENST00000557713 TRIM38O00635 465 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 TLX3O43711 291 aaPredicted RBP16.35■□□□□ 0.21
SCFD1-224ENST00000557713 BNIP3LO60238 219 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 TFE3P19532 575 aaPredicted RBP16.35■□□□□ 0.21
SCFD1-224ENST00000557713 ACP1P24666 158 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 ITPKBP27987 946 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 KRT9P35527 623 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 SNX16P57768 344 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 KRT83P78385 493 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 ALFQ53S48 1182 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 NEK5Q6P3R8 708 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 CREBRFQ8IUR6 639 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 TMEM145Q8NBT3 493 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 TMIEQ8NEW7 156 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 OR2A12Q8NGT7 310 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 NT5C3BQ969T7 300 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 KLHDC7BQ96G42 594 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 TKTL2Q9H0I9 626 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms