RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 A0A0A0MRY4 1105 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CTAGE9A4FU28 777 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 TJP3O95049 919 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 PLK1P53350 603 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ST8SIA6P61647 398 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 SULT2A1Q06520 285 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 SERINC3Q13530 473 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 AFMIDQ63HM1 303 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 RETSATQ6NUM9 610 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ARHGAP36Q6ZRI8 547 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CCDC105Q8IYK2 499 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ALLCQ8N6M5 410 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CCNYQ8ND76 341 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 RPLP0P6Q8NHW5 317 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 LRRN4Q8WUT4 740 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 P3H4Q92791 437 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 PBXIP1Q96AQ6 731 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ACOX2Q99424 681 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ACE2Q9BYF1 805 aaPredicted RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 SP110Q9HB58 689 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CACNA2D2Q9NY47 1150 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ERVW-1Q9UQF0 538 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 FAM86C2PA6NEL3 165 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 KDELR3O43731 214 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 KLF8O95600 359 aaPredicted RBP14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ASLP04424 464 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 PECAM1P16284 738 aaPredicted RBP14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 PTPN7P35236 360 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 KIR2DL1P43626 348 aaPredicted RBP14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ZNF234Q14588 700 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ACCSLQ4AC99 568 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 CWF19L1Q69YN2 538 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 SERPINA13PQ6UXR4 307 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 SYT10Q6XYQ8 523 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 BBS12Q6ZW61 710 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ZSCAN30Q86W11 494 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ZNF687Q8N1G0 1237 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ATP11CQ8NB49 1132 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 CCDC26Q8TAB7 109 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ACDQ96AP0 544 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 FAM118BQ9BPY3 351 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 PRDM16Q9HAZ2 1276 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 IPO11Q9UI26 975 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 ACTL7AQ9Y615 435 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 A0A0C4DFX4 3053 aa14.35□□□□□ -0.11
VIPAS39-208ENST00000556412 WASH3PC4AMC7 463 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 J3KR12 359 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 PI15O43692 258 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 MT-CO1P00395 513 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 MX2P20592 715 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 TGM2P21980 687 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 CASQ1P31415 396 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 NNMTP40261 264 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 ETF1P62495 437 aaKnown RBP14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 ARF5P84085 180 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 SLC10A2Q12908 348 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 PTPRNQ16849 979 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 SDE2Q6IQ49 451 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 ZNF366Q8N895 744 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 TXNDC5Q8NBS9 432 aaKnown RBP14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 USP33Q8TEY7 942 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 OSBPL9Q96SU4 736 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 SLCO3A1Q9UIG8 710 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 HCN2Q9UL51 889 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 SNX12Q9UMY4 172 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 EFR3BQ9Y2G0 817 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 STARD13Q9Y3M8 1113 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 TCRBV7S2A1N4TA0A589 114 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 K7ERQ8 282 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 BNIP3LO60238 219 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 FGGP02679 453 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 HLA-EP13747 358 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 GARSP41250 739 aaKnown RBP14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 IL12RB1P42701 662 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 GALNT2Q10471 571 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 LONRF2Q1L5Z9 754 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 PKN3Q6P5Z2 889 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 SLC13A5Q86YT5 568 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 IL17RCQ8NAC3 791 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 ZNF592Q92610 1267 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 OSBPL6Q9BZF3 934 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 THAP10Q9P2Z0 257 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 STON1Q9Y6Q2 735 aa14.34□□□□□ -0.11
VIPAS39-208ENST00000556412 TTC34A8MYJ7 566 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 APOC4-APOC2K7ER74 178 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 PRAMEF11O60813 436 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 ZMPSTE24O75844 475 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 APOC2P02655 101 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 NR2C2P49116 596 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 MRPS21P82921 87 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 AP1B1Q10567 949 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 FZD5Q13467 585 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 NYAP1Q6ZVC0 841 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 TRMT11Q7Z4G4 463 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.12
VIPAS39-208ENST00000556412 COG1Q8WTW3 980 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms