RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 BST2Q10589 180 aaKnown RBP14.49□□□□□ -0.09
PTCH1-217ENST00000548420 STILQ15468 1287 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 GOLGA7BQ2TAP0 167 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 TCP11X2Q5H9J9 407 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 NCEH1Q6PIU2 408 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 SCML4Q8N228 414 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 SLC35F5Q8WV83 523 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 KCTD13Q8WZ19 329 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 SKA1Q96BD8 255 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 KLF16Q9BXK1 252 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-217ENST00000548420 KDM4CQ9H3R0 1056 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.49□□□□□ -0.09
PTCH1-217ENST00000548420 ANO10Q9NW15 660 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 CLIC5Q9NZA1 410 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 APEX2Q9UBZ4 518 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 ANAPC2Q9UJX6 822 aa14.49□□□□□ -0.09
PTCH1-217ENST00000548420 RP1L1Q8IWN7 2480 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-217ENST00000548420 A0A1W2PQH9 124 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 TLR5O60602 858 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 RTN2O75298 545 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 GABBR2O75899 941 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 TBX18O95935 607 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 SETSIPP0DME0 302 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 SLC8A3P57103 927 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 APBA1Q02410 837 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 KCNMA1Q12791 1236 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 GJB7Q6PEY0 223 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 SASS6Q6UVJ0 657 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 SERPINA13PQ6UXR4 307 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 C11orf57Q6ZUT1 292 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-217ENST00000548420 BHLHA9Q7RTU4 235 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 VASH2Q86V25 355 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 OR4C6Q8NH72 309 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 UBA3Q8TBC4 463 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 SSC4DQ8WTU2 575 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 ADNPQ9H2P0 1102 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 TMEM245Q9H330 911 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 HESX1Q9UBX0 185 aa14.48□□□□□ -0.09
PTCH1-217ENST00000548420 A0A1B0GTL3 188 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 WIPF3A6NGB9 483 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 LRRC10BA6NIK2 292 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 BECN2A8MW95 431 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 SEMA7AO75326 666 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 PENKP01210 267 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-217ENST00000548420 CALCAP01258 141 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 SLC5A2P31639 672 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 ATP5C1P36542 298 aaKnown RBP14.47□□□□□ -0.09
PTCH1-217ENST00000548420 RPL34P49207 117 aaKnown RBP14.47□□□□□ -0.09
PTCH1-217ENST00000548420 STX1AQ16623 288 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 MEA1Q16626 185 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 HSP90AA4PQ58FG1 418 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 FYB2Q5VWT5 728 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 C1QL3Q5VWW1 255 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 ARL14Q8N4G2 192 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 UCMAQ8WVF2 138 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 SHC3Q92529 594 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 POM121Q96HA1 1249 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 PRSS16Q9NQE7 514 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 FANCLQ9NW38 375 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 APCP25054 2843 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 MED13LQ71F56 2210 aa14.47□□□□□ -0.09
PTCH1-217ENST00000548420 FFAR2O15552 330 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 ZBED1O96006 694 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 GP1BAP07359 652 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 RARGP13631 454 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 DGKAP23743 735 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 BRD2P25440 801 aaKnown RBP14.46□□□□□ -0.09
PTCH1-217ENST00000548420 TKTL1P51854 596 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 OXCT1P55809 520 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 PMF1Q6P1K2 205 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 OXR1Q8N573 874 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 MAPK15Q8TD08 544 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 ZNF606Q8WXB4 792 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 ARRDC3Q96B67 414 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 HSFY1Q96LI6 401 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 APOLD1Q96LR9 279 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 ULBP1Q9BZM6 244 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 ABCG4Q9H172 646 aa14.46□□□□□ -0.09
PTCH1-217ENST00000548420 CLDN1O95832 211 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 DNTTP04053 509 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 ITGA2BP08514 1039 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 ZNF18P17022 549 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 GPD2P43304 727 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 PDX1P52945 283 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 ZBTB16Q05516 673 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 TYRO3Q06418 890 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 KCNAB2Q13303 367 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 KRT31Q15323 416 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 KLHDC7AQ5VTJ3 777 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 Q6ZNB5 142 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 ARHGAP18Q8N392 663 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 WDR36Q8NI36 951 aaKnown RBP14.45□□□□□ -0.1
PTCH1-217ENST00000548420 STK32AQ8WU08 396 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 SERAC1Q96JX3 654 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 CDK5RAP1Q96SZ6 601 aaKnown RBP14.45□□□□□ -0.1
PTCH1-217ENST00000548420 CIPCQ9C0C6 399 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 HSD3B7Q9H2F3 369 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 MTG2Q9H4K7 406 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 LRRC4Q9HBW1 653 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 CNGB3Q9NQW8 809 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms