RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ERVMER34-1Q9H9K5 563 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 VPS28Q9UK41 221 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 MAN1B1Q9UKM7 699 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 ITPR1Q14643 2758 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 A0A1B0GVM2 712 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 A0A1W2PQU0 124 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 TCAF2A6NFQ2 919 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 C10orf142B7Z368 130 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 C1QTNF3-AMACRE9PGA6 284 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 PRAMEF26H0Y7S4 382 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 K7ERQ8 282 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 RNF103O00237 685 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 BIN1O00499 593 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 KPNA3O00505 521 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 MED7O43513 233 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 MAGEC1O60732 1142 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 ENDOD1O94919 500 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 PCDH8O95206 1070 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 MT-CO1P00395 513 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 MPOP05164 745 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 DGKAP23743 735 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 ACP1P24666 158 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 GNA15P30679 374 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 ACTN2P35609 894 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 RPL34P49207 117 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 PLK1P53350 603 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 CLDN2P57739 230 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 TAS2R38P59533 333 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 CDK17Q00537 523 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 PROX2Q3B8N5 592 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 SETMARQ53H47 684 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 HS1BP3Q53T59 392 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 OR6B2Q6IFH4 312 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 C14orf80Q86SX3 495 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 ZNF605Q86T29 641 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 TMEM110Q86TL2 294 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 SPATA20Q8TB22 786 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 ALG14Q96F25 216 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 DHTKD1Q96HY7 919 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 LGMNQ99538 433 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 CRACR2AQ9BSW2 395 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 MUC3BQ9H195 1237 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 HOOK1Q9UJC3 728 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 PPM1HQ9ULR3 514 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 SNX10Q9Y5X0 201 aa12.28□□□□□ -0.44
TRAFD1-205ENST00000548277 MCF2LO15068 1137 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 SLC7A4O43246 635 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 ATP9BO43861 1147 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 SNAP91O60641 907 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 CNTN5O94779 1100 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 IGLV3-25P01717 112 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 CTSLP07711 333 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 CCR1P32246 355 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 E2F1Q01094 437 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 APBA1Q02410 837 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 GCNT1Q02742 428 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 KCNMA1Q12791 1236 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 ZNF211Q13398 564 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 ILKQ13418 452 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 AUHQ13825 339 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 TBC1D25Q3MII6 688 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 ARHGAP40Q5TG30 622 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 IQCHQ86VS3 1027 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 TRIM69Q86WT6 500 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 SPACA3Q8IXA5 215 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 SH2D3CQ8N5H7 860 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 ATP11CQ8NB49 1132 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 CHST14Q8NCH0 376 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 OR13H1Q8NG92 308 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 ARRDC3Q96B67 414 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 NOX5Q96PH1 765 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 TRIM62Q9BVG3 475 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 SRRTQ9BXP5 876 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 KDM4CQ9H3R0 1056 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 TPX2Q9ULW0 747 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 DMTF1Q9Y222 760 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 HS3ST4Q9Y661 456 aa12.27□□□□□ -0.45
TRAFD1-205ENST00000548277 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 PMM2O15305 246 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 P4HA2O15460 535 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 SMAD6O43541 496 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 USP12O75317 370 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 PAGE1O75459 146 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 NEBLO76041 1014 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 AFPP02771 609 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 SLC2A3P11169 496 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 SRCP12931 536 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 RRM1P23921 792 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 CHRNA3P32297 505 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 OXCT1P55809 520 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 RNASE9P60153 205 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 TLE3Q04726 772 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 PDCLQ13371 301 aa12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 EIF4EBP2Q13542 120 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 TAF1BQ53T94 588 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-205ENST00000548277 TTI2Q6NXR4 508 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms