RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PTAR1Q7Z6K3 402 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-209ENST00000547018 KCNMB4Q86W47 210 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 CCNYL1Q8N7R7 359 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 ZSCAN18Q8TBC5 510 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-209ENST00000547018 C10orf82Q8WW14 230 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 DHRS4Q9BTZ2 278 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 NMUR2Q9GZQ4 415 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 PNPOQ9NVS9 261 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 PACSIN3Q9UKS6 424 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 HS3ST4Q9Y661 456 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 MEI4A8MW99 385 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 E9PAM4 449 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 ADAM12O43184 909 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 ZMPSTE24O75844 475 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 OAS1P00973 400 aaKnown RBP12.96□□□□□ -0.33
SCAF11-209ENST00000547018 PLK1P53350 603 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 RTP2Q5QGT7 225 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 FSTL4Q6MZW2 842 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 FAM171BQ6P995 826 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 LRRC8DQ7L1W4 858 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 CRLF3Q8IUI8 442 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 HIPK4Q8NE63 616 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 LRRC40Q9H9A6 602 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 SP110Q9HB58 689 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 CYLDQ9NQC7 956 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 KNL1Q8NG31 2342 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 FAM159BA6NKW6 160 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 BNIP3LO60238 219 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 ESRRAP11474 423 aaPredicted RBP12.96□□□□□ -0.33
SCAF11-209ENST00000547018 PRKCHP24723 683 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 CD86P42081 329 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 GLUD2P49448 558 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 SLC10A7Q0GE19 358 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 UBAP2LQ14157 1087 aaKnown RBP12.96□□□□□ -0.33
SCAF11-209ENST00000547018 PAFAH1B3Q15102 231 aaKnown RBP12.96□□□□□ -0.33
SCAF11-209ENST00000547018 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 LIMS2Q7Z4I7 341 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.33
SCAF11-209ENST00000547018 NUP93Q8N1F7 819 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 DTX3LQ8TDB6 740 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 PPP4R1Q8TF05 950 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 PSMG2Q969U7 264 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 SMIM14Q96QK8 99 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 TASP1Q9H6P5 420 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 CYP4F12Q9HCS2 524 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 SNX15Q9NRS6 342 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 GKN1Q9NS71 199 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 MARCH2Q9P0N8 246 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 PRKAG3Q9UGI9 489 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 SLC12A4Q9UP95 1085 aa12.96□□□□□ -0.33
SCAF11-209ENST00000547018 CHD7Q9P2D1 2997 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 A0A096LPK6 155 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 OR51F1A6NGY5 319 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 AURKAO14965 403 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 RASSF9O75901 435 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 NEK3P51956 506 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 DSC2Q02487 901 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 MPP3Q13368 585 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 DSC3Q14574 896 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 RAB41Q5JT25 222 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 RPS27LQ71UM5 84 aaKnown RBP12.96□□□□□ -0.34
SCAF11-209ENST00000547018 C16orf59Q7L2K0 433 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 MCUR1Q96AQ8 359 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 GRAMD1AQ96CP6 724 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 HMCESQ96FZ2 354 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 TEKT5Q96M29 485 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 SUDS3Q9H7L9 328 aaPredicted RBP12.96□□□□□ -0.34
SCAF11-209ENST00000547018 CYP4F11Q9HBI6 524 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 KANSL3Q9P2N6 904 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 PCDHB5Q9Y5E4 795 aa12.96□□□□□ -0.34
SCAF11-209ENST00000547018 NBNO60934 754 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 ENTPD5O75356 428 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 DCTN3O75935 186 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 AP2A1O95782 977 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 MT-CO1P00395 513 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 C1QAP02745 245 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 HLA-DQB2P05538 268 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 HOXD10P28358 340 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 OR1D2P34982 312 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 ETV4P43268 484 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 PPIDQ08752 370 aaKnown RBP12.95□□□□□ -0.34
SCAF11-209ENST00000547018 LACTB2Q53H82 288 aaPredicted RBP12.95□□□□□ -0.34
SCAF11-209ENST00000547018 ITPRIPL1Q6GPH6 555 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 SLC41A1Q8IVJ1 513 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 RNF208Q9H0X6 261 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCAF11-209ENST00000547018 GGA2Q9UJY4 613 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 ADAM28Q9UKQ2 775 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 KCTD3Q9Y597 815 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 TK2O00142 265 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 FCHO1O14526 889 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 TSPAN8P19075 237 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 YWHAQP27348 245 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 RPL34P49207 117 aaKnown RBP12.95□□□□□ -0.34
SCAF11-209ENST00000547018 SLC11A1P49279 550 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 CFAP157Q5JU67 520 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 RASIP1Q5U651 963 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 PIK3R6Q5UE93 754 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms