RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 A0A087X1B8 175 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 PCP4L1A6NKN8 68 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.67■□□□□ 0.1
CHD4-210ENST00000544040 STAT5AP42229 794 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 GMPSP49915 693 aaPredicted RBP15.67■□□□□ 0.1
CHD4-210ENST00000544040 CDC42P60953 191 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 NPNTQ6UXI9 565 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 MCOLN3Q8TDD5 553 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 RHOBTB2Q9BYZ6 727 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 A0A1W2PRG6 482 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 GAS2O43903 313 aaKnown RBP15.67■□□□□ 0.1
CHD4-210ENST00000544040 TSPAN9O75954 239 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 PTDSS1P48651 473 aaKnown RBP15.67■□□□□ 0.1
CHD4-210ENST00000544040 AP5B1Q2VPB7 878 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 ZNF484Q5JVG2 852 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 FBXO10Q9UK96 956 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 ADGRL3Q9HAR2 1447 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 KRT36O76013 467 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 ALADP13716 330 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 LAMTOR4Q0VGL1 99 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 MTAPQ13126 283 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 KCTD19Q17RG1 926 aaPredicted RBP15.67■□□□□ 0.1
CHD4-210ENST00000544040 CHPFQ8IZ52 775 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 SPATA20Q8TB22 786 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 CHST7Q9NS84 486 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 ARL15Q9NXU5 204 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 KDM6BO15054 1643 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 NCAM2O15394 837 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 PEX11AO75192 247 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 SEMA3DO95025 777 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 BMP10O95393 424 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 URODP06132 367 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 CRY1Q16526 586 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 ARHGAP36Q6ZRI8 547 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 FBXW8Q8N3Y1 598 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 REPS1Q96D71 796 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 DEFB129Q9H1M3 183 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 CLN6Q9NWW5 311 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 PHF11Q9UIL8 331 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 UBE2QL1A1L167 161 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 BANF1O75531 89 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 ECDO95905 644 aaPredicted RBP15.66■□□□□ 0.1
CHD4-210ENST00000544040 SGCGQ13326 291 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 BROXQ5VW32 411 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 GCNT7Q6ZNI0 430 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 FRMD6Q96NE9 622 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 NLNQ9BYT8 704 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 SAR1AQ9NR31 198 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 CRNNQ9UBG3 495 aaPredicted RBP15.66■□□□□ 0.1
CHD4-210ENST00000544040 AREL1O15033 823 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 CALCAP01258 141 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 RBL1P28749 1068 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 XRRA1Q6P2D8 792 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 SLC30A10Q6XR72 485 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 ARMCX6Q7L4S7 300 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 GLT1D1Q96MS3 346 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 ENTPD4Q9Y227 616 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 CYP4B1P13584 511 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 CDH8P55286 799 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 ITGB3BPQ13352 177 aaPredicted RBP15.66■□□□□ 0.1
CHD4-210ENST00000544040 LGI2Q8N0V4 545 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 AENQ8WTP8 325 aaKnown RBP15.66■□□□□ 0.1
CHD4-210ENST00000544040 CLIP3Q96DZ5 547 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 SNCAIPQ9Y6H5 919 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 RBAK-RBAKDNI3L0D1 243 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 TMCC2O75069 709 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 PTPN3P26045 913 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 FBXO47Q5MNV8 452 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 FAM220AQ7Z4H9 259 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 BTRCQ9Y297 605 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.19e-7■□□□□ 10.6
CHD4-210ENST00000544040 GPR1P46091 355 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 PRKAA2P54646 552 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 C1QBPQ07021 282 aaKnown RBP15.66■□□□□ 0.1
CHD4-210ENST00000544040 SPIDRQ14159 915 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 SPESP1Q6UW49 350 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 HPS6Q86YV9 775 aa15.66■□□□□ 0.1
CHD4-210ENST00000544040 FFAR3O14843 346 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 GPR42O15529 346 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 CETPP11597 493 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 IL12AP29459 219 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 SCIMPQ6UWF3 145 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 CAMK1DQ8IU85 385 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 YME1L1Q96TA2 773 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 MED14O60244 1454 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 H7C0S8 307 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 BUD23O43709 281 aaKnown RBP15.65■□□□□ 0.1
CHD4-210ENST00000544040 DPYSL3Q14195 570 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 TIMM50Q3ZCQ8 353 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 FIGNQ5HY92 759 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 NET1Q7Z628 596 aaPredicted RBP15.65■□□□□ 0.1
CHD4-210ENST00000544040 MBOAT7Q96N66 472 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 SYT15Q9BQS2 421 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 DNAJC18Q9H819 358 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 KBTBD4Q9NVX7 518 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 KCNK4Q9NYG8 393 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 MAGP20916 626 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 HNMTP50135 292 aa15.65■□□□□ 0.1
CHD4-210ENST00000544040 TOP3AQ13472 1001 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms