RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 GRID2O43424 1007 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 CLASP2O75122 1294 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 E2F6O75461 281 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 GRAP2O75791 330 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 MPOP05164 745 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 YBX3P16989 372 aaKnown RBP eCLIP18.93■□□□□ 0.623e-8■■□□□ 11.6
SFSWAP-207ENST00000538548 TFEBP19484 476 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 SPRP35270 261 aaPredicted RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 HALP42357 657 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 FAM183BPQ6ZVS7 135 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 TTC30AQ86WT1 665 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 ZNF420Q8TAQ5 688 aaPredicted RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 PLEKHA8Q96JA3 519 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 NPAS2Q99743 824 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 CIB1Q99828 191 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 EIF2B3Q9NR50 452 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 CPSF3Q9UKF6 684 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 CDC14AQ9UNH5 594 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 PLOD2O00469 737 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 POLBP06746 335 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 SUPT20HL2P0C7V6 817 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 BCAP31P51572 246 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 LIMK2P53671 638 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 C21orf59P57076 290 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 NSUN2Q08J23 767 aaKnown RBP eCLIP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 PRKAA1Q13131 559 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 CAPSQ13938 189 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 SMAD1Q15797 465 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 SUPT20HL1Q3ZLR7 823 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 HACE1Q8IYU2 909 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 TFAP2CQ92754 450 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 ITPKCQ96DU7 683 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 DUS3LQ96G46 650 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 ANKRD36BP1Q96IX9 119 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 ELOVL4Q9GZR5 314 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 PIH1D1Q9NWS0 290 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 DUS2Q9NX74 493 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 HMGXB4Q9UGU5 601 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 DOLKQ9UPQ8 538 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 MYO18AQ92614 2054 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 A0A0A0MRY4 1105 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 TMEM247A6NEH6 219 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 DPYSL4O14531 572 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 RGS20O76081 388 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 SLC7A1P30825 629 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 CD151P48509 253 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 PSME3P61289 254 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 CCDC92Q53HC0 331 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 NXNQ6DKJ4 435 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 DCLRE1AQ6PJP8 1040 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 PTAR1Q7Z6K3 402 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 HERC6Q8IVU3 1022 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 TNIP2Q8NFZ5 429 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 TMEM176AQ96HP8 235 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 SPATA13Q96N96 652 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 MRPL4Q9BYD3 311 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 CROCCQ5TZA2 2017 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 PTPRFP10586 1907 aa18.92■□□□□ 0.62
SFSWAP-207ENST00000538548 ATE1O95260 518 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 OATP04181 439 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 HSPA1AP0DMV8 641 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 HSPA1BP0DMV9 641 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 FSTL4Q6MZW2 842 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 ZBTB49Q6ZSB9 765 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 LYSMD3Q7Z3D4 306 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 CDAN1Q8IWY9 1227 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 HTR3CQ8WXA8 447 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 SLCO4A1Q96BD0 722 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 DOK1Q99704 481 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 EFHD1Q9BUP0 239 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 SYBUQ9NX95 663 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 PCDHGA7Q9Y5G6 932 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 COPG1Q9Y678 874 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 SOBPA7XYQ1 873 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 PIK3R2O00459 728 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 BAIAP3O94812 1187 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 PIGNO95427 931 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 INHBBP09529 407 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 TTKP33981 857 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 HOXD12P35452 270 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 IRF9Q00978 393 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 ARL13AQ5H913 290 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 PPP4R4Q6NUP7 873 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 UBA3Q8TBC4 463 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 TBC1D15Q8TC07 691 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 ATXN7L3BQ96GX2 97 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 PCDHAC1Q9H158 963 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 RPF2Q9H7B2 306 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 FADS3Q9Y5Q0 445 aa18.91■□□□□ 0.62
SFSWAP-207ENST00000538548 TCRBV3S1A0A5B6 114 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 F5H423 210 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 FOXD2O60548 495 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 MSCO60682 206 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 CILPO75339 1184 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 KRT19P08727 400 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 GABRB3P28472 473 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 TRAP1Q12931 704 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 BAATQ14032 418 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 SPANXN3Q5MJ09 141 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 LIPMQ5VYY2 423 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms