RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 EBF1Q9UH73 591 aa7.34□□□□□ -1.23
YBX3-206ENST00000536823 GGT7Q9UJ14 662 aa7.34□□□□□ -1.23
YBX3-206ENST00000536823 ZNF510Q9Y2H8 683 aa7.34□□□□□ -1.23
YBX3-206ENST00000536823 SNX11Q9Y5W9 270 aa7.34□□□□□ -1.23
YBX3-206ENST00000536823 CEP295Q9C0D2 2601 aa7.34□□□□□ -1.23
YBX3-206ENST00000536823 ACACBO00763 2458 aa7.34□□□□□ -1.24
YBX3-206ENST00000536823 PLXND1Q9Y4D7 1925 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 CACNA1EQ15878 2313 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 KNL1Q8NG31 2342 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 TBC1D3BA6NDS4 549 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 YJEFN3A6XGL0 299 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 E7ENQ6 273 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 LRP3O75074 770 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 FBXO24O75426 580 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 RPP40O75818 363 aaKnown RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 FBXO21O94952 628 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 PENKP01210 267 aaPredicted RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 LTFP02788 710 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 RETP07949 1114 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 HMBSP08397 361 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 LCP1P13796 627 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 HNRNPLP14866 589 aaKnown RBP eCLIP7.33□□□□□ -1.24
YBX3-206ENST00000536823 MFAP3P55082 362 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 RPS26P62854 115 aaKnown RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 MAN2A1Q16706 1144 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 C10orf76Q5T2E6 689 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 BSPRYQ5W0U4 402 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 GJB7Q6PEY0 223 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 TPGS1Q6ZTW0 290 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 TRMT11Q7Z4G4 463 aaKnown RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 RASSF3Q86WH2 238 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 FMNL3Q8IVF7 1028 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 FAM114A1Q8IWE2 563 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 FAM217AQ8IXS0 508 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 CCDC33Q8N5R6 958 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 ALLCQ8N6M5 410 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 NAT16Q8N8M0 369 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 TXNDC5Q8NBS9 432 aaKnown RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 RNF139Q8WU17 664 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 ASB11Q8WXH4 323 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 IRGQQ8WZA9 623 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 SHC3Q92529 594 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 P2RY11Q96G91 374 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 GBP4Q96PP9 640 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 XPO6Q96QU8 1125 aaKnown RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 DUSP23Q9BVJ7 150 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 PARD6AQ9NPB6 346 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 UBE2TQ9NPD8 197 aaPredicted RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 ABCC13Q9NSE7 274 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 APEX2Q9UBZ4 518 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 AGO1Q9UL18 857 aaKnown RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 HBS1LQ9Y450 684 aaKnown RBP7.33□□□□□ -1.24
YBX3-206ENST00000536823 CHD8Q9HCK8 2581 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 DNAH14Q0VDD8 3507 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 PI4KAP42356 2102 aa7.33□□□□□ -1.24
YBX3-206ENST00000536823 BECN2A8MW95 431 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 SGK1O00141 431 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 GFRA2O00451 464 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 TRIM24O15164 1050 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 MSI1O43347 362 aaKnown RBP7.32□□□□□ -1.24
YBX3-206ENST00000536823 THAP12O43422 761 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 MED7O43513 233 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 LETM1O95202 739 aaPredicted RBP7.32□□□□□ -1.24
YBX3-206ENST00000536823 EPN2O95208 641 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 LATS1O95835 1130 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CELA3AP09093 270 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 SLC9A1P19634 815 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 TGM1P22735 817 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 PON1P27169 355 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CHKAP35790 457 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 GPD2P43304 727 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 ACADSBP45954 432 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 RPL34P49207 117 aaKnown RBP7.32□□□□□ -1.24
YBX3-206ENST00000536823 DGKEP52429 567 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
YBX3-206ENST00000536823 APBA1Q02410 837 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 LMNB2Q03252 620 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CRY1Q16526 586 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CT47A1Q5JQC4 288 aaPredicted RBP7.32□□□□□ -1.24
YBX3-206ENST00000536823 MIIPQ5JXC2 388 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 EOGTQ5NDL2 527 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 EMC10Q5UCC4 262 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 EGFLAMQ63HQ2 1017 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 ANO7Q6IWH7 933 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 DENND1BQ6P3S1 775 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 DBX2Q6ZNG2 339 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 RBM43Q6ZSC3 357 aaKnown RBP7.32□□□□□ -1.24
YBX3-206ENST00000536823 TOGARAM2Q6ZUX3 1019 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CACNA2D4Q7Z3S7 1137 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 KBTBD6Q86V97 674 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CREBRFQ8IUR6 639 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 DENND1CQ8IV53 801 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CPXM2Q8N436 756 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 ZNF513Q8N8E2 541 aaPredicted RBP7.32□□□□□ -1.24
YBX3-206ENST00000536823 MDGA1Q8NFP4 955 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 GPT2Q8TD30 523 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 CLEC4CQ8WTT0 213 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 LOXL4Q96JB6 756 aa7.32□□□□□ -1.24
YBX3-206ENST00000536823 TUBGCP2Q9BSJ2 902 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms