RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 H0Y8X5 98 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 I6L893 689 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 CBX4O00257 560 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 ENC1O14682 589 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 MID1O15344 667 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 BRINP1O60477 761 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 MOCS3O95396 460 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 NTRK1P04629 796 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 IGHV4-34P06331 123 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 C6P13671 934 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 UCHL3P15374 230 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 CYP11B1P15538 503 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 TFE3P19532 575 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 MZF1P28698 734 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 ACTN2P35609 894 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 IRAK1P51617 712 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 GALCP54803 685 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 SNX16P57768 344 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 AUHQ13825 339 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 KCNJ12Q14500 433 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 CST6Q15828 149 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 TTC31Q49AM3 519 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 ARHGAP40Q5TG30 622 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 HES3Q5TGS1 186 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 LAYNQ6UX15 382 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 C14orf80Q86SX3 495 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 CIR1Q86X95 450 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 DHX40Q8IX18 779 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 ZNF683Q8IZ20 524 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 ENOX1Q8TC92 643 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 WBP1Q96G27 269 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 RPL10LQ96L21 214 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 NOX5Q96PH1 765 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 NEUROG2Q9H2A3 272 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 FAM204AQ9H8W3 233 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 EBF2Q9HAK2 575 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 FBXL12Q9NXK8 326 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 RRN3Q9NYV6 651 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 TBC1D30Q9Y2I9 924 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 PCDHGA1Q9Y5H4 931 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 HS3ST4Q9Y661 456 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 PTPN13Q12923 2485 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 COL12A1Q99715 3063 aa10.36□□□□□ -0.75
CLSTN3-203ENST00000534830 COL5A1P20908 1838 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 A0A1W2PPC4 97 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 M0QYT0 321 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 ATP9BO43861 1147 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 RNASEH1O60930 286 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 PAGE1O75459 146 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 RFPL3O75679 317 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 ADCY5O95622 1261 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 LDOC1O95751 146 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 PDGFRAP16234 1089 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 EEF1GP26641 437 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 CD27P26842 260 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 GRIA4P48058 902 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 CXCR3P49682 368 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 STK19P49842 368 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 OXCT1P55809 520 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 SULT2A1Q06520 285 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 DNAJC3Q13217 504 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 HSP90AA4PQ58FG1 418 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 KCNT1Q5JUK3 1230 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 BRMS1LQ5PSV4 323 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 RABGAP1LQ5R372 815 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 CDKAL1Q5VV42 579 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 BROXQ5VW32 411 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 KIAA0895LQ68EN5 471 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 TRNP1Q6NT89 227 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 ARCQ7LC44 396 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 ADAT2Q7Z6V5 191 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 XYLT1Q86Y38 959 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 GATAD2AQ86YP4 633 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 MMAAQ8IVH4 418 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 CCDC117Q8IWD4 279 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 STK40Q8N2I9 435 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 AADATQ8N5Z0 425 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 TMEM35BQ8NCS4 154 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 C18orf8Q96DM3 657 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 CNDP2Q96KP4 475 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 C1orf74Q96LT6 269 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 FEM1AQ9BSK4 669 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 STK33Q9BYT3 514 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 GANQ9H2C0 597 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 CPNE5Q9HCH3 593 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 TM9SF3Q9HD45 589 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 PIGVQ9NUD9 493 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 TMEM51Q9NW97 253 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 TMEM59LQ9UK28 342 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 FZD4Q9ULV1 537 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 NCKAP1Q9Y2A7 1128 aa10.35□□□□□ -0.75
CLSTN3-203ENST00000534830 IGLV3-10A0A075B6K4 115 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 SYNJ2BP-COX16A0A087WUM0 186 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 A0A1W2PP55 124 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 DRGXA6NNA5 263 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 F8VZ95 297 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 CLDN11O75508 207 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 CDK4P11802 303 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms