RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 GPR15P49685 360 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 POLR2FP61218 127 aaKnown RBP9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 LIN9Q5TKA1 542 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 PKN3Q6P5Z2 889 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 CRIP3Q6Q6R5 217 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 VSTM1Q6UX27 236 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 C4orf50Q6ZRC1 276 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 ARHGEF18Q6ZSZ5 1173 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 CCDC149Q6ZUS6 474 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 RTL10Q7L3V2 364 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 TTC30AQ86WT1 665 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 SPATA2LQ8IUW3 424 aaPredicted RBP9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 VSTM4Q8IW00 320 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 C12orf76Q8N812 135 aaPredicted RBP9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 SMRP1Q8NCR6 262 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 NEK11Q8NG66 645 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 OLIG1Q8TAK6 271 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 SLC2A14Q8TDB8 520 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 SEC16BQ96JE7 1060 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 MRGPRX3Q96LB0 322 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 HNRNPABQ99729 332 aaKnown RBP9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 SMOQ99835 787 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 SEMA4AQ9H3S1 761 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 SFXN1Q9H9B4 322 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 CYP4F11Q9HBI6 524 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 CSNK1G1Q9HCP0 422 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 NLRC4Q9NPP4 1024 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 FTSJ1Q9UET6 329 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 CDH22Q9UJ99 828 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 COG5Q9UP83 839 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 PATJQ8NI35 1801 aa9.21□□□□□ -0.93
CCDC90B-217ENST00000530253 HHLA1C9JL84 531 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 PRRG1O14668 218 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 BEST1O76090 585 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 GYPCP04921 128 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 VDRP11473 427 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 KRT5P13647 590 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 IL9P15248 144 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 HOXB8P17481 243 aaPredicted RBP9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 BDNFP23560 247 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 ADORA2BP29275 332 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 HOXC12P31275 282 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 ZNF75DP51815 510 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 TWF1Q12792 350 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 RAPGEF1Q13905 1077 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 GOLGA7BQ2TAP0 167 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 MGAT5BQ3V5L5 792 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 PPM1LQ5SGD2 360 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 CLEC20AQ6ZU45 233 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 SPRED1Q7Z699 444 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 GPR149Q86SP6 731 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 TMC8Q8IU68 726 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 STKLD1Q8NE28 680 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 SUSD6Q92537 303 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 CYFIP2Q96F07 1278 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 C8orf48Q96LL4 319 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 SEPT5Q99719 369 aaPredicted RBP9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 DEF6Q9H4E7 631 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 DPP7Q9UHL4 492 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 NOCTQ9UK39 431 aaKnown RBP9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 TSPAN16Q9UKR8 245 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 DENND4AQ7Z401 1863 aa9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 MTCL1Q9Y4B5 1905 aaKnown RBP9.21□□□□□ -0.94
CCDC90B-217ENST00000530253 F8VP50 259 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 H7BY64 318 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 TULP2O00295 520 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 CCL16O15467 120 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 FAM200BP0CF97 657 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 SRGAP2BP0DMP2 458 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 CD19P15391 556 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 HMGA1P17096 107 aaKnown RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 TRIM21P19474 475 aaKnown RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 ELF1P32519 619 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 SOX5P35711 763 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 TUFMP49411 452 aaKnown RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 EPHA5P54756 1037 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 PPP2CBP62714 309 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 PPP2CAP67775 309 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 TBX2Q13207 712 aaPredicted RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 ICAM4Q14773 271 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 CNGA2Q16280 664 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 MEA1Q16626 185 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 DDR2Q16832 855 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 AAK1Q2M2I8 961 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 RARS2Q5T160 578 aaKnown RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 ACBD5Q5T8D3 534 aaPredicted RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 SDHAF4Q5VUM1 108 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 LCLAT1Q6UWP7 414 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 TMC5Q6UXY8 1006 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 CYP26C1Q6V0L0 522 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 NOP9Q86U38 636 aaKnown RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 SLC47A2Q86VL8 602 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 KLHL36Q8N4N3 616 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 SMARCD1Q96GM5 515 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 MRFAP1L1Q96HT8 127 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 SPATA17Q96L03 361 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 CEP295NLQ96MC4 621 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 CCDC140Q96MF4 163 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms