RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 TFR2Q9UP52 801 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 AP4E1Q9UPM8 1137 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 PCDHGA2Q9Y5H1 932 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 CHURC1-FNTBB4DL54 471 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 DAPK3O43293 454 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 BUB1O43683 1085 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 SPOPO43791 374 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 PROSCO94903 275 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 MOCS3O95396 460 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 RHOCP08134 193 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
CCDC84-205ENST00000528088 FNTBP49356 437 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 CCR3P51677 355 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 VAV2P52735 878 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 TPI1P60174 286 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 KIF5AQ12840 1032 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 SRSF5Q13243 272 aaKnown RBP11.32□□□□□ -0.6
CCDC84-205ENST00000528088 KRT81Q14533 505 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 KCNT1Q5JUK3 1230 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 HEATR6Q6AI08 1181 aaKnown RBP11.32□□□□□ -0.6
CCDC84-205ENST00000528088 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 ZNF354CQ86Y25 554 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 TMEM139Q8IV31 216 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 LRRC8AQ8IWT6 810 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 ALDH16A1Q8IZ83 802 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 AHI1Q8N157 1196 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 PYROXD2Q8N2H3 581 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 RPLP0P6Q8NHW5 317 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 EZH1Q92800 747 aaPredicted RBP11.32□□□□□ -0.6
CCDC84-205ENST00000528088 TBC1D31Q96DN5 1066 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 C1orf74Q96LT6 269 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
CCDC84-205ENST00000528088 ZYG11BQ9C0D3 744 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 GGA2Q9UJY4 613 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 CLEC4EQ9ULY5 219 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 ZNF232Q9UNY5 417 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 WASF2Q9Y6W5 498 aa11.32□□□□□ -0.6
CCDC84-205ENST00000528088 SPTBN4Q9H254 2564 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 I6L893 689 aaPredicted RBP11.31□□□□□ -0.6
CCDC84-205ENST00000528088 CLDN11O75508 207 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 POLR2EP19388 210 aaKnown RBP11.31□□□□□ -0.6
CCDC84-205ENST00000528088 EPHB2P29323 1055 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 OR1E1P30953 314 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 CD70P32970 193 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 PCK1P35558 622 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 TNFRSF4P43489 277 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 IRAK1P51617 712 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 CDH4P55283 916 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 MESP2Q0VG99 397 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 SCAPQ12770 1279 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 LMAN2Q12907 356 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 LPAL2Q16609 132 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 GEN1Q17RS7 908 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 RNF219Q5W0B1 726 aaPredicted RBP11.31□□□□□ -0.6
CCDC84-205ENST00000528088 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 SFTPA1Q8IWL2 248 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 KIAA2013Q8IYS2 634 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 SYNPOQ8N3V7 929 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
CCDC84-205ENST00000528088 NIPA2Q8N8Q9 360 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 WFDC5Q8TCV5 224 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 WFIKKN2Q8TEU8 576 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 P2RY11Q96G91 374 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 PEBP4Q96S96 227 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 MAGEB5Q9BZ81 275 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 OSBPL2Q9H1P3 480 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 ZDHHC4Q9NPG8 344 aa11.31□□□□□ -0.6
CCDC84-205ENST00000528088 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC84-205ENST00000528088 MACROD2A1Z1Q3 448 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 PRRT4C9JH25 899 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 FAM72CH0Y354 149 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 K7EQS6 105 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 MEN1O00255 615 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 EEF2KO00418 725 aaKnown RBP11.3□□□□□ -0.6
CCDC84-205ENST00000528088 GFRA2O00451 464 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 ATG13O75143 517 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 CNTN5O94779 1100 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 LRIG2O94898 1065 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 ZIC2O95409 532 aaPredicted RBP11.3□□□□□ -0.6
CCDC84-205ENST00000528088 CISD3P0C7P0 127 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 HLA-FP30511 346 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 L1CAMP32004 1257 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 ARL4AP40617 200 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 CSKP41240 450 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 ARHGAP25P42331 645 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 WASP42768 502 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 PXNP49023 591 aaPredicted RBP11.3□□□□□ -0.6
CCDC84-205ENST00000528088 OXCT1P55809 520 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 FOXC1Q12948 553 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 IFI16Q16666 785 aaKnown RBP11.3□□□□□ -0.6
CCDC84-205ENST00000528088 BOLA3Q53S33 107 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 ALFQ53S48 1182 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 C6orf118Q5T5N4 469 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 FAM72AQ5TYM5 149 aa11.3□□□□□ -0.6
CCDC84-205ENST00000528088 FAM72DQ6L9T8 149 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms