RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 VPS51Q9UID3 782 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 INTS6Q9UL03 887 aaKnown RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 NENFQ9UMX5 172 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SCML1Q9UN30 329 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 HS3ST2Q9Y278 367 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 PCDHA13Q9Y5I0 950 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 EPN1Q9Y6I3 576 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZDBF2Q9HCK1 2354 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 MUC3AQ02505 3323 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 A0A0A6YYK5 440 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 A0A0D9SEW6 157 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PRR23AA6NEV1 266 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SOWAHDA6NJG2 315 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 MEI4A8MW99 385 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 WASH4PA8MWX3 477 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 TTC34A8MYJ7 566 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 DFFAO00273 331 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 ALOX15BO15296 676 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 HRO43593 1189 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 BUB1O43683 1085 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 ATP9BO43861 1147 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 FOXD2O60548 495 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SNAP91O60641 907 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SIN3BO75182 1162 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 NEBLO76041 1014 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 MTA2O94776 668 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 LCA5LO95447 670 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 IL1BP01584 269 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PRNPP04156 253 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 RARAP10276 462 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CHRM1P11229 460 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 GOT1P17174 413 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 FECHP22830 423 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CD6P30203 668 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 P2RY2P41231 377 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CTSOP43234 321 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PSMD8P48556 350 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 HCAR3P49019 387 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 DHPSP49366 369 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 NUMBP49757 651 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 MRE11P49959 708 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SERPINH1P50454 418 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 VASPP50552 380 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 DNA2P51530 1060 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CDH6P55285 790 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 RPL6Q02878 288 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC25A11Q02978 314 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 RAD51Q06609 339 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 KIF5AQ12840 1032 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SEMA3BQ13214 749 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SRSF5Q13243 272 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PDK2Q15119 407 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 DLG2Q15700 870 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CST6Q15828 149 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 DPYSL2Q16555 572 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 LPAL2Q16609 132 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 KCNT1Q5JUK3 1230 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SPDYCQ5MJ68 293 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SYCP2LQ5T4T6 812 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CFAP58Q5T655 872 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 C22orf39Q6P5X5 142 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 LINGO4Q6UY18 593 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 Q6ZVU0 165 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CYP2U1Q7Z449 544 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 POLNQ7Z5Q5 900 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 RABEPKQ7Z6M1 372 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 KBTBD6Q86V97 674 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 NLRP14Q86W24 1093 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 RHOT1Q8IXI2 618 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 UMODL1-AS1Q8N2C9 162 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 BBS5Q8N3I7 341 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 RYBPQ8N488 228 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SH2D3CQ8N5H7 860 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 FAM160A2Q8N612 972 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 GPR161Q8N6U8 529 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PCDH20Q8N6Y1 951 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PAF1Q8N7H5 531 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CASKIN2Q8WXE0 1202 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 FOXJ1Q92949 421 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARHGEF2Q92974 986 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PPP1R16AQ96I34 528 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 LOXL4Q96JB6 756 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 MRGPRX3Q96LB0 322 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PEBP4Q96S96 227 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 KCTD15Q96SI1 283 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 OMDQ99983 421 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 MAK16Q9BXY0 300 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 RSPH9Q9H1X1 276 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 GRPEL1Q9HAV7 217 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 OSGEPQ9NPF4 335 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PRSS16Q9NQE7 514 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 DDX56Q9NY93 547 aaKnown RBP5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLCO3A1Q9UIG8 710 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 HCN2Q9UL51 889 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 CYP8B1Q9UNU6 501 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 INVSQ9Y283 1065 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 PCDHGA5Q9Y5G8 931 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 OR51B4Q9Y5P0 310 aa5.52□□□□□ -1.53
HMGB1P40-201ENST00000525121 F5P12259 2224 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms