RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 MRM3Q9HC36 420 aaKnown RBP13.03□□□□□ -0.32
CPEB4-208ENST00000520867 PRDM11Q9NQV5 511 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
CPEB4-208ENST00000520867 GLTPQ9NZD2 209 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 ATAD5Q96QE3 1844 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 SPOPO43791 374 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 DEAF1O75398 565 aaPredicted RBP13.03□□□□□ -0.32
CPEB4-208ENST00000520867 IL18RAPO95256 599 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 GNRH1P01148 92 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 IFNA16P05015 189 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 GNAO1P09471 354 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 ACTN1P12814 892 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 MX2P20592 715 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 DDCP20711 480 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 SOX11P35716 441 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 AQP5P55064 265 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 BFSP2Q13515 415 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 ZFP1Q6P2D0 407 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 TTC33Q6PID6 262 aaPredicted RBP13.03□□□□□ -0.32
CPEB4-208ENST00000520867 S100ZQ8WXG8 99 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 RNF170Q96K19 258 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 DMRTB1Q96MA1 342 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 MYD88Q99836 296 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 ZSWIM1Q9BR11 485 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 CDADC1Q9BWV3 514 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 DHX33Q9H6R0 707 aaKnown RBP13.03□□□□□ -0.32
CPEB4-208ENST00000520867 LRRC19Q9H756 370 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 MTRRQ9UBK8 725 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 NWD1Q149M9 1564 aa13.03□□□□□ -0.32
CPEB4-208ENST00000520867 TRAV20A0A0B4J274 112 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 SSX5O60225 188 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 DAB1O75553 588 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 DLGAP3O95886 979 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 ATF2P15336 505 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 UCHL3P15374 230 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 SCNN1GP51170 649 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.32
CPEB4-208ENST00000520867 AQP6Q13520 282 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.32
CPEB4-208ENST00000520867 ERAP2Q6P179 960 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 SYDE1Q6ZW31 735 aaPredicted RBP13.02□□□□□ -0.32
CPEB4-208ENST00000520867 NEK8Q86SG6 692 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 SLC13A5Q86YT5 568 aaPredicted RBP13.02□□□□□ -0.32
CPEB4-208ENST00000520867 FNIP1Q8TF40 1166 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.32
CPEB4-208ENST00000520867 CDRT15Q96T59 188 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 MAPRE3Q9UPY8 281 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 PCDHGA7Q9Y5G6 932 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 NRCAMQ92823 1304 aa13.02□□□□□ -0.32
CPEB4-208ENST00000520867 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SDR42E2A6NKP2 422 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 LINC00587B1AMM8 73 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 TRAF5O00463 557 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SERPINI2O75830 405 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SNAP29O95721 258 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 PRKCBP05771 671 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 HOXA7P31268 230 aaPredicted RBP13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SERPINB5P36952 375 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 ETV4P43268 484 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 FUT2Q10981 343 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 MTM1Q13496 603 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 PTK6Q13882 451 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 CACHD1Q5VU97 1274 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 FCRLBQ6BAA4 426 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SLC16A12Q6ZSM3 486 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 LACC1Q8IV20 430 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 LGI2Q8N0V4 545 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 BANPQ8N9N5 519 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SYTL5Q8TDW5 730 aaPredicted RBP13.02□□□□□ -0.33
CPEB4-208ENST00000520867 RAB2BQ8WUD1 216 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 NELL1Q92832 810 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 CIDECQ96AQ7 238 aaPredicted RBP13.02□□□□□ -0.33
CPEB4-208ENST00000520867 ST6GAL2Q96JF0 529 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 GLT1D1Q96MS3 346 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 KLF6Q99612 283 aaPredicted RBP13.02□□□□□ -0.33
CPEB4-208ENST00000520867 PRDM8Q9NQV8 689 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
CPEB4-208ENST00000520867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.02□□□□□ -0.33
CPEB4-208ENST00000520867 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 WBP11Q9Y2W2 641 aaKnown RBP13.02□□□□□ -0.33
CPEB4-208ENST00000520867 TCAF1Q9Y4C2 921 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SNCAIPQ9Y6H5 919 aa13.02□□□□□ -0.33
CPEB4-208ENST00000520867 SIGLEC1Q9BZZ2 1709 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 OR6C65A6NJZ3 312 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 TRDMT1O14717 391 aaKnown RBP13.01□□□□□ -0.33
CPEB4-208ENST00000520867 HTRA2O43464 458 aaPredicted RBP13.01□□□□□ -0.33
CPEB4-208ENST00000520867 AKAP10O43572 662 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 MAFO75444 373 aaPredicted RBP13.01□□□□□ -0.33
CPEB4-208ENST00000520867 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
CPEB4-208ENST00000520867 CD40LGP29965 261 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 EPHX2P34913 555 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 NUBP1P53384 320 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 SCRN3Q0VDG4 424 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 GRM7Q14831 915 aa13.01□□□□□ -0.33
CPEB4-208ENST00000520867 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
CPEB4-208ENST00000520867 NHSL2Q5HYW2 709 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms