RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GHRHRQ02643 423 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PTH1RQ03431 593 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAPQ12884 760 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PAK1Q13153 545 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 ITGADQ13349 1161 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NAB1Q13506 487 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 IDI1Q13907 227 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 HERC3Q15034 1050 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NR0B2Q15466 257 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NAB2Q15742 525 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 TAF1BQ53T94 588 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 ESCO2Q56NI9 601 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 IGSF11Q5DX21 431 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RILPL1Q5EBL4 403 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PPM1LQ5SGD2 360 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 HYIQ5T013 277 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 VWA5B1Q5TIE3 1220 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 KLHDC7AQ5VTJ3 777 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 C1orf146Q5VVC0 180 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATG16L1Q676U5 607 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 ANKRD40Q6AI12 368 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 GTF2IRD2BQ6EKJ0 949 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NFRKBQ6P4R8 1299 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLNKQ7Z7G1 428 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 GTF2IRD2Q86UP8 949 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 IRF2BP1Q8IU81 584 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 GALNT13Q8IUC8 556 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 LACC1Q8IV20 430 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RTKN2Q8IZC4 609 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SIX6OS1Q8N1H7 587 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SRBD1Q8N5C6 995 aaKnown RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 VGLL2Q8N8G2 317 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 OR2W6PQ8NHA6 318 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CDC26Q8NHZ8 85 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PNPT1Q8TCS8 783 aaKnown RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 DTX3LQ8TDB6 740 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SSH3Q8TE77 659 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PPP4R1Q8TF05 950 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYDGFQ969H8 173 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SH3KBP1Q96B97 665 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 WNK4Q96J92 1243 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 C20orf173Q96LM9 149 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 C17orf62Q9BQA9 187 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMEM79Q9BSE2 394 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 KIFC3Q9BVG8 833 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NUSAP1Q9BXS6 441 aaKnown RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 TEX13BQ9BXU2 312 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PITHD1Q9GZP4 211 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 TP63Q9H3D4 680 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 AZI2Q9H6S1 392 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SPC25Q9HBM1 224 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 TRIM39Q9HCM9 518 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CASS4Q9NQ75 786 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 KMT5AQ9NQR1 393 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SDHAF3Q9NRP4 125 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RIC8BQ9NVN3 520 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SNTG2Q9NY99 539 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 FNIP2Q9P278 1114 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRWD1Q9UFC0 647 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 AGO2Q9UKV8 859 aaKnown RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RIMKLBQ9ULI2 386 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 STRIP2Q9ULQ0 834 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PHTF1Q9UMS5 762 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CHKBQ9Y259 395 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYRFQ9Y2G1 1151 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 DTNAQ9Y4J8 743 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC12A7Q9Y666 1083 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYH1P12882 1939 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRRIQ1Q96JM4 1722 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 HMGXB3Q12766 1538 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 ABCB11O95342 1321 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SALL1Q9NSC2 1324 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 KDM3AQ9Y4C1 1321 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NEURL4Q96JN8 1562 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RTL9Q8NET4 1388 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NCAPD2Q15021 1401 aa4.9□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYH2Q9UKX2 1941 aa4.9□□□□□ -1.62
HMGB1P19-201ENST00000517578 ERVK-7P63135 1459 aa4.9□□□□□ -1.62
HMGB1P19-201ENST00000517578 TRAV6A0A075B6T7 132 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A087WWV3 80 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A1W2PQ72 361 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A1W2PRG0 241 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SHISA3A0PJX4 238 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TYW5A2RUC4 315 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 FITM1A5D6W6 292 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM47DPA6NHR8 397 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SAGE2PA6NJ88 616 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 LRRC72A6NJI9 287 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 MEI4A8MW99 385 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 H0Y858 1186 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 H3BSA7 217 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCRL2O00421 344 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 E2F3O00716 465 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 HDAC3O15379 428 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 BUD23O43709 281 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A9O60656 530 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TOM1O60784 492 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms