RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MCF2LO15068 1137 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 ATMINO43313 823 aaPredicted RBP16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 CBFA2T2O43439 604 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 SMAD6O43541 496 aaKnown RBP16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 TPM3P06753 285 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 FAM228BP0C875 321 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 SRCP12931 536 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 GLDCP23378 1020 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 HOXD12P35452 270 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 GNA12Q03113 381 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 SLC20A2Q08357 652 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 CST6Q15828 149 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 DUOXA1Q1HG43 343 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 AASDHQ4L235 1098 aaPredicted RBP16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 SYCP2LQ5T4T6 812 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 STPG1Q5TH74 334 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 RWDD4Q6NW29 188 aaKnown RBP16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 USP30Q70CQ3 517 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 TMC6Q7Z403 805 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 C1orf216Q8TAB5 229 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 CEP76Q8TAP6 659 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 FNIP1Q8TF40 1166 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 RTKNQ9BST9 563 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 C2orf49Q9BVC5 232 aaPredicted RBP16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 NEUROG2Q9H2A3 272 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 TMEM248Q9NWD8 314 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 FBXL12Q9NXK8 326 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 ARHGAP20Q9P2F6 1191 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 SLC25A13Q9UJS0 675 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 PPM1HQ9ULR3 514 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 SLC6A14Q9UN76 642 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 NEU3Q9UQ49 428 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 SPTBN2O15020 2390 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 MUC22E2RYF6 1773 aaPredicted RBP16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 LNP1A1A4G5 178 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 DCDC2BA2VCK2 349 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 C10orf142B7Z368 130 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 MID1O15344 667 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 ZNF821O75541 412 aaPredicted RBP16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 CD160O95971 181 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 MYBL1P10243 752 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 PSMA2P25787 234 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 AIF1P55008 147 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 ZNF252P-AS1Q0IIN9 211 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 SEMA3BQ13214 749 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 ELAVL3Q14576 367 aaKnown RBP16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 TRIM61Q5EBN2 209 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 WDR45BQ5MNZ6 344 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 SPECC1LQ69YQ0 1117 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 DCAF4L2Q8NA75 395 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 OR8K1Q8NGG5 319 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 TBC1D31Q96DN5 1066 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 BTBD1Q9H0C5 482 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 PCED1AQ9H1Q7 454 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 C6orf106Q9H6K1 298 aaPredicted RBP16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 SGK2Q9HBY8 427 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 CAPN10Q9HC96 672 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 MRPL47Q9HD33 250 aaKnown RBP16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 CDV3Q9UKY7 258 aaKnown RBP16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 SARDHQ9UL12 918 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 NCKAP1Q9Y2A7 1128 aa16.52■□□□□ 0.24
PDLIM5-212ENST00000509333 LAMA1P25391 3075 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 SERPINF2P08697 491 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 GOT1P17174 413 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 C5AR1P21730 350 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 ACVRL1P37023 503 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 MAPKAPK2P49137 400 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 SFSWAPQ12872 951 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 TDRD12Q587J7 1177 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 EFHC2Q5JST6 749 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 DCAF12L1Q5VU92 463 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 ALKBH5Q6P6C2 394 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 LINGO4Q6UY18 593 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 VPS36Q86VN1 386 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 VSTM4Q8IW00 320 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 RGL4Q8IZJ4 473 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 AADATQ8N5Z0 425 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 ATP11CQ8NB49 1132 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 ARHGEF2Q92974 986 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 ZNF653Q96CK0 615 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 MAGEH1Q9H213 219 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 NOL6Q9H6R4 1146 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 MYO1AQ9UBC5 1043 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 SERGEFQ9UGK8 458 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 DNAI1Q9UI46 699 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 NENFQ9UMX5 172 aa16.51■□□□□ 0.23
PDLIM5-212ENST00000509333 DNAH14Q0VDD8 3507 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 CXorf51AA0A1B0GTR3 108 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 A0A1W2PP55 124 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 C4orf47A7E2U8 309 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 WASH4PA8MWX3 477 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 CBX4O00257 560 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 SEMA4FO95754 770 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 IL1BP01584 269 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 MIPP30301 263 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 EIF4A3P38919 411 aaKnown RBP16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 GALCP54803 685 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 ARF5P84085 180 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 ASTE1Q2TB18 679 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms