RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MARK2Q7KZI7 788 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 ADGRG6Q86SQ4 1221 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 TAC4Q86UU9 113 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 ABI1Q8IZP0 508 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PPP1R14CQ8TAE6 165 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PGAP3Q96FM1 320 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PGLYRP2Q96PD5 576 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 CCDC106Q9BWC9 280 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 CEP41Q9BYV8 373 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 SLC13A1Q9BZW2 595 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PAK6Q9NQU5 681 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 EIF2B3Q9NR50 452 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 SPATS2LQ9NUQ6 558 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 FBXW11Q9UKB1 542 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 HBS1LQ9Y450 684 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 SNX10Q9Y5X0 201 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 MAD1L1Q9Y6D9 718 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 DPPA5A6NC42 116 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SDR42E2A6NKP2 422 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 H3BRJ5 948 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TMEM189-UBE2V1I3L0A0 370 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TNFRSF10BO14763 440 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 AHCYL1O43865 530 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TADA2AO75478 443 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 OAZ2O95190 189 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 EN2P19622 333 aaPredicted RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PAX3P23760 479 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 ACTR3P61158 418 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 MXRA7P84157 204 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SCAPQ12770 1279 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SEMA3BQ13214 749 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 BFSP2Q13515 415 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TMCO4Q5TGY1 634 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SDHAF4Q5VUM1 108 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 HEATR6Q6AI08 1181 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TMEM154Q6P9G4 183 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SCN4BQ8IWT1 228 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PIWIL2Q8TC59 973 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TFB1MQ8WVM0 346 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 FAM161BQ96MY7 647 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 RILPQ96NA2 401 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SLC9A7Q96T83 725 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 ZNF184Q99676 751 aaPredicted RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TKTL2Q9H0I9 626 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 VCX3BQ9H321 246 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PDP2Q9P2J9 529 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 COL4A4P53420 1690 aaPredicted RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 VWA8A3KMH1 1905 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 ARHGEF37A1IGU5 675 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 DGKIO75912 1065 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 ENO1P06733 434 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 FESP07332 822 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 GJA8P48165 433 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 GPR15P49685 360 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 CCL23P55773 120 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 ALYREFQ86V81 257 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 MYLK4Q86YV6 388 aaPredicted RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TTC9BQ8N6N2 239 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 DQX1Q8TE96 717 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PPP4R1Q8TF05 950 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 WDR60Q8WVS4 1066 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 HTR3CQ8WXA8 447 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 IRGQQ8WZA9 623 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 NTAN1Q96AB6 310 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 TRAPPC9Q96Q05 1148 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 GPR62Q9BZJ7 368 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 ZCWPW1Q9H0M4 648 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 WDCPQ9H6R7 721 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PLAC1Q9HBJ0 212 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SMYD2Q9NRG4 433 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PCMTD2Q9NV79 361 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 NUDT5Q9UKK9 219 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 ADAM28Q9UKQ2 775 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 SOX13Q9UN79 622 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PLA2G4CQ9UP65 541 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 APOBEC2Q9Y235 224 aaKnown RBP11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PCDHB7Q9Y5E2 793 aa11.25□□□□□ -0.61
SH3RF1-203ENST00000508685 PATJQ8NI35 1801 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 SCN5AQ14524 2016 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 CCDC189A1A4V9 331 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 DCLK1O15075 740 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 MSI1O43347 362 aaKnown RBP11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 CSH1P0DML2 217 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 CSH2P0DML3 217 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 ERCC2P18074 760 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 CXCR3P49682 368 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 SESN3P58005 492 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 TPI1P60174 286 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 IRX4P78413 519 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 DDR2Q16832 855 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 FAM171A1Q5VUB5 890 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 LRRC8BQ6P9F7 803 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 DENND5BQ6ZUT9 1274 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 ZNF534Q76KX8 674 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms