RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ALG14Q96F25 216 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 TBCBQ99426 244 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 C2orf49Q9BVC5 232 aaPredicted RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 ACE2Q9BYF1 805 aaPredicted RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 NLRC4Q9NPP4 1024 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 TMEM59LQ9UK28 342 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 TPX2Q9ULW0 747 aaKnown RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 PCDHGB2Q9Y5G2 931 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 SNX11Q9Y5W9 270 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 ANKRD11Q6UB99 2663 aaPredicted RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 CABIN1Q9Y6J0 2220 aa12.27□□□□□ -0.44
MED28-203ENST00000503945 TMEM131Q92545 1883 aa12.27□□□□□ -0.44
MED28-203ENST00000503945 FASNP49327 2511 aaKnown RBP12.27□□□□□ -0.45
MED28-203ENST00000503945 FAM170AA1A519 330 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 KCNK3O14649 394 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 MCF2LO15068 1137 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 CNTN5O94779 1100 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 IGHV4-34P06331 123 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.45
MED28-203ENST00000503945 OR1E1P30953 314 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 CCR5P51681 352 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 UBXN1Q04323 297 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 ACAP1Q15027 740 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 SYCP1Q15431 976 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 ARL13BQ3SXY8 428 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 C6orf118Q5T5N4 469 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 DBX2Q6ZNG2 339 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 PRPF39Q86UA1 669 aaKnown RBP12.27□□□□□ -0.45
MED28-203ENST00000503945 ATP11CQ8NB49 1132 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 NEK11Q8NG66 645 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 EPS8L1Q8TE68 723 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 FRS2Q8WU20 508 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 CDC6Q99741 560 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 KDM4CQ9H3R0 1056 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 PPM1HQ9ULR3 514 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 APOBEC2Q9Y235 224 aaKnown RBP12.27□□□□□ -0.45
MED28-203ENST00000503945 GPSM3Q9Y4H4 160 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 OR51B4Q9Y5P0 310 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 GOLGA4Q13439 2230 aaKnown RBP12.27□□□□□ -0.45
MED28-203ENST00000503945 LAMA5O15230 3695 aa12.27□□□□□ -0.45
MED28-203ENST00000503945 E9PAM4 449 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 C1QTNF3-AMACRE9PGA6 284 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 VILLO15195 856 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 BNIP3LO60238 219 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 ENDOD1O94919 500 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 CYP1A1P04798 512 aaPredicted RBP12.26□□□□□ -0.45
MED28-203ENST00000503945 RHOCP08134 193 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 CCDC172P0C7W6 258 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 VAV1P15498 845 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 MMP8P22894 467 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 FLT3P36888 993 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 GGCXP38435 758 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 KLK7P49862 253 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 IRAK1P51617 712 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 COPB1P53618 953 aaKnown RBP12.26□□□□□ -0.45
MED28-203ENST00000503945 NOMO3P69849 1222 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 ATP11AP98196 1134 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 MYL5Q02045 173 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 SLC20A2Q08357 652 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 STX1AQ16623 288 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 ALFQ53S48 1182 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 SLC45A4Q5BKX6 768 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 TRIM72Q6ZMU5 477 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 PHLDB2Q86SQ0 1253 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 GLRX5Q86SX6 157 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 SH2D3CQ8N5H7 860 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 OR52K2Q8NGK3 314 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 SLC30A5Q8TAD4 765 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 CCDC114Q96M63 670 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 CFAP57Q96MR6 1250 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 SPON2Q9BUD6 331 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 NAT10Q9H0A0 1025 aaKnown RBP12.26□□□□□ -0.45
MED28-203ENST00000503945 GANQ9H2C0 597 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 CCDC86Q9H6F5 360 aaKnown RBP12.26□□□□□ -0.45
MED28-203ENST00000503945 ANLNQ9NQW6 1124 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 AASDHPPTQ9NRN7 309 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 MPP6Q9NZW5 540 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 LIMA1Q9UHB6 759 aaKnown RBP12.26□□□□□ -0.45
MED28-203ENST00000503945 NOCTQ9UK39 431 aaKnown RBP12.26□□□□□ -0.45
MED28-203ENST00000503945 FNDC3AQ9Y2H6 1198 aaKnown RBP12.26□□□□□ -0.45
MED28-203ENST00000503945 SNX10Q9Y5X0 201 aa12.26□□□□□ -0.45
MED28-203ENST00000503945 ILVBLA1L0T0 632 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 ALOX15BO15296 676 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 FLRT2O43155 660 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 SLC7A4O43246 635 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 MBD3O95983 291 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 MT-CO1P00395 513 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 KRT3P12035 628 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 CHRNB2P17787 502 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 CD38P28907 300 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 SDC4P31431 198 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 ADRA1BP35368 520 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 RECQLP46063 649 aaPredicted RBP12.25□□□□□ -0.45
MED28-203ENST00000503945 NSFP46459 744 aaKnown RBP12.25□□□□□ -0.45
MED28-203ENST00000503945 JAM2P57087 298 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 OTUD1Q5VV17 481 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms