RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NDFIP2Q9NV92 336 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 VPS51Q9UID3 782 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 HPCAL4Q9UM19 191 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 AP4E1Q9UPM8 1137 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-213ENST00000498495 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.11□□□□□ -0.31
HSPG2-213ENST00000498495 DMDP11532 3685 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 EIF3CLB5ME19 914 aaKnown RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 MYO1FO00160 1098 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 DAPK3O43293 454 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 BNIP3LO60238 219 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 RAMP2O60895 175 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 MT-CO1P00395 513 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 IL1BP01584 269 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 CYP1A2P05177 515 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 H2AFZP0C0S5 128 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 C7P10643 843 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 SRCP12931 536 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 VAV1P15498 845 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 GLDCP23378 1020 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 ITPKAP23677 461 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 SLC8A1P32418 973 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 TPI1P60174 286 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF252P-AS1Q0IIN9 211 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 TBX2Q13207 712 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 POLD3Q15054 466 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 SF3A2Q15428 464 aaKnown RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 CST6Q15828 149 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 AASDHQ4L235 1098 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 SYCP2LQ5T4T6 812 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 LINGO4Q6UY18 593 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 H2AFVQ71UI9 128 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 DSG4Q86SJ6 1040 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF354CQ86Y25 554 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 SYT12Q8IV01 421 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 SLC41A1Q8IVJ1 513 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 CADM4Q8NFZ8 388 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 FRS2Q8WU20 508 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 OR8D1Q8WZ84 308 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 ARHGEF2Q92974 986 aaKnown RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 HSPA12BQ96MM6 686 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 EIF3CQ99613 913 aaKnown RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 OMDQ99983 421 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 BTBD1Q9H0C5 482 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 MAGEH1Q9H213 219 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 SMOC1Q9H4F8 434 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 NHEJ1Q9H9Q4 299 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 DONSONQ9NYP3 566 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 IP6K2Q9UHH9 426 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 HS3ST2Q9Y278 367 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 CKAP5Q14008 2032 aa13.1□□□□□ -0.31
HSPG2-213ENST00000498495 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-213ENST00000498495 METTL12A8MUP2 240 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 K7ERQ8 282 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 EEF2KO00418 725 aaKnown RBP13.09□□□□□ -0.31
HSPG2-213ENST00000498495 KHNYNO15037 678 aaKnown RBP13.09□□□□□ -0.31
HSPG2-213ENST00000498495 MCF2LO15068 1137 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 MID1O15344 667 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 LRCH4O75427 683 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 C5AR1P21730 350 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 SDHBP21912 280 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 ACSL1P33121 698 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 HTR7P34969 479 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 PCK1P35558 622 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 ACVRL1P37023 503 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 PSMD8P48556 350 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 CLCN6P51797 869 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 WDR45BQ5MNZ6 344 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 FAM46CQ5VWP2 391 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 Q6ZVU0 165 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 USP30Q70CQ3 517 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 GAS2L3Q86XJ1 694 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 PSTKQ8IV42 348 aaKnown RBP13.09□□□□□ -0.31
HSPG2-213ENST00000498495 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
HSPG2-213ENST00000498495 CTNNBL1Q8WYA6 563 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-213ENST00000498495 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 PEBP4Q96S96 227 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
HSPG2-213ENST00000498495 ACE2Q9BYF1 805 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-213ENST00000498495 SGK2Q9HBY8 427 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 CTTNBP2NLQ9P2B4 639 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 SDK1Q7Z5N4 2213 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 USP34Q70CQ2 3546 aa13.09□□□□□ -0.31
HSPG2-213ENST00000498495 RALGAPA1Q6GYQ0 2036 aa13.08□□□□□ -0.31
HSPG2-213ENST00000498495 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 A0A1W2PP55 124 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 MEI4A8MW99 385 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms