RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 LMCD1Q9NZU5 365 aa11.24□□□□□ -0.61
COMMD6-212ENST00000497707 IPO11Q9UI26 975 aaKnown RBP11.24□□□□□ -0.61
COMMD6-212ENST00000497707 ZNF510Q9Y2H8 683 aa11.24□□□□□ -0.61
COMMD6-212ENST00000497707 ACTL7AQ9Y615 435 aa11.24□□□□□ -0.61
COMMD6-212ENST00000497707 CLUHO75153 1309 aa11.24□□□□□ -0.61
COMMD6-212ENST00000497707 PRRC2BQ5JSZ5 2229 aaKnown RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 SOX1O00570 391 aaPredicted RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 CLDN11O75508 207 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 GLDCP23378 1020 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 OR1E1P30953 314 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 GRIA1P42261 906 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 NUMBP49757 651 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 GNA12Q03113 381 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 CAV1Q03135 178 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 TNK2Q07912 1038 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 DHX9Q08211 1270 aaKnown RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 USP4Q13107 963 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 CALCOCO2Q13137 446 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 SEMA5AQ13591 1074 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 MORF4L2Q15014 288 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 POLD3Q15054 466 aaPredicted RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 PARP6Q2NL67 630 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 RABGAP1LQ5R372 815 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 SYCP2LQ5T4T6 812 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 FYB2Q5VWT5 728 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 C4orf22Q6V702 233 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 ZNF534Q76KX8 674 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 OTOP3Q7RTS5 596 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 PID1Q7Z2X4 250 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 CAND1Q86VP6 1230 aaKnown RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 TMEM25Q86YD3 366 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 LRRC49Q8IUZ0 686 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 NPAS3Q8IXF0 933 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 PPIL6Q8IXY8 311 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 PGBD5Q8N414 524 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 TEX26Q8N6G2 289 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 NSMCE3Q96MG7 304 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 FMO2Q99518 471 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 DDX50Q9BQ39 737 aaKnown RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 WDR83Q9BRX9 315 aaKnown RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 MLPHQ9BV36 600 aaPredicted RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 FAM129AQ9BZQ8 928 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 SEMA4AQ9H3S1 761 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 RAB6BQ9NRW1 208 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 DNAJC17Q9NVM6 304 aaKnown RBP11.23□□□□□ -0.61
COMMD6-212ENST00000497707 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 IGSF9Q9P2J2 1179 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 HPCAL4Q9UM19 191 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 SH3BP1Q9Y3L3 701 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 NFS1Q9Y697 457 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 DOCK8Q8NF50 2099 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 PDE4DIPQ5VU43 2346 aa11.23□□□□□ -0.61
COMMD6-212ENST00000497707 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.22□□□□□ -0.61
COMMD6-212ENST00000497707 A0A1B0GVM2 712 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 ILVBLA1L0T0 632 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 TCAF2A6NFQ2 919 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 ARHGAP42A6NI28 874 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 E7ESA3 106 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 F5H423 210 aaPredicted RBP11.22□□□□□ -0.61
COMMD6-212ENST00000497707 AGPSO00116 658 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 ALOX15BO15296 676 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 CHADO15335 359 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 KDELR3O43731 214 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 PRAMEF11O60813 436 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 OPHN1O60890 802 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 RAMP2O60895 175 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 TBX10O75333 385 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 BANF1O75531 89 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 ZMPSTE24O75844 475 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 LUC7L3O95232 432 aaKnown RBP11.22□□□□□ -0.61
COMMD6-212ENST00000497707 CCNB1P14635 433 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 FSHRP23945 695 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 PSMB4P28070 264 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 MZF1P28698 734 aaPredicted RBP11.22□□□□□ -0.61
COMMD6-212ENST00000497707 HSD17B3P37058 310 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 AVPR1AP37288 418 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 VIPR2P41587 438 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 IL10RBQ08334 325 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 NIPAL4Q0D2K0 466 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 SLC10A7Q0GE19 358 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 ZNF177Q13360 481 aaPredicted RBP11.22□□□□□ -0.61
COMMD6-212ENST00000497707 PARP15Q460N3 678 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 FAM78AQ5JUQ0 283 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 KCTD11Q693B1 232 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 LEKR1Q6ZMV7 388 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 HDXQ7Z353 690 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 PCGF5Q86SE9 256 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 SETD3Q86TU7 594 aaPredicted RBP11.22□□□□□ -0.61
COMMD6-212ENST00000497707 HOOK3Q86VS8 718 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 RELL1Q8IUW5 271 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 IGDCC3Q8IVU1 814 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 ATPAF2Q8N5M1 289 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 TDRD5Q8NAT2 981 aaKnown RBP11.22□□□□□ -0.61
COMMD6-212ENST00000497707 MCUQ8NE86 351 aa11.22□□□□□ -0.61
COMMD6-212ENST00000497707 ST13P5Q8NFI4 369 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms