RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 VPS36Q86VN1 386 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 DNAAF5Q86Y56 855 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 MMAAQ8IVH4 418 aaKnown RBP23.19■■□□□ 1.3
SNIP1-203ENST00000493916 STK40Q8N2I9 435 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 FNIP1Q8TF40 1166 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 DNASE2BQ8WZ79 361 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 NUSAP1Q9BXS6 441 aaKnown RBP23.19■■□□□ 1.3
SNIP1-203ENST00000493916 BTBD1Q9H0C5 482 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 SGK2Q9HBY8 427 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 TMEM248Q9NWD8 314 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 CNOT8Q9UFF9 292 aaKnown RBP23.19■■□□□ 1.3
SNIP1-203ENST00000493916 TMEM191CA6NGB0 347 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 METTL12A8MUP2 240 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 MEI4A8MW99 385 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 MID1O15344 667 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 SNAP91O60641 907 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 ADH1BP00325 375 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 L1CAMP32004 1257 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 ACSL1P33121 698 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 CLCN6P51797 869 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 IRX4P78413 519 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 GNA12Q03113 381 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 DLG2Q15700 870 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 RWDD4Q6NW29 188 aaKnown RBP23.18■■□□□ 1.3
SNIP1-203ENST00000493916 SCYL2Q6P3W7 929 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 DGLUCYQ7Z3D6 616 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 DRC7Q8IY82 874 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 OR7D4Q8NG98 312 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 ZNF653Q96CK0 615 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 MAGEB5Q9BZ81 275 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 SUSD2Q9UGT4 822 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 ADAMTS1Q9UHI8 967 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 FZD10Q9ULW2 581 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 NCKAP1Q9Y2A7 1128 aa23.18■■□□□ 1.3
SNIP1-203ENST00000493916 CXorf51AA0A1B0GTR3 108 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 ALOX15BO15296 676 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 SEMA4FO95754 770 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 SERPINF2P08697 491 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 SRCP12931 536 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 C5AR1P21730 350 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 PSMA2P25787 234 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 CASP14P31944 242 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 ETFBP38117 255 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 TRIM14Q14142 442 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 ACCSLQ4AC99 568 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 DCAF12L1Q5VU92 463 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 SPECC1LQ69YQ0 1117 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 DSG4Q86SJ6 1040 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 RGL4Q8IZJ4 473 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 CAPN10Q9HC96 672 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 FBXL12Q9NXK8 326 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 FZD4Q9ULV1 537 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 SLC6A14Q9UN76 642 aa23.17■■□□□ 1.3
SNIP1-203ENST00000493916 ZMPSTE24O75844 475 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 MT-CO1P00395 513 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 CFIP05156 583 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 HNRNPH3P31942 346 aaKnown RBP23.16■■□□□ 1.3
SNIP1-203ENST00000493916 SLC8A1P32418 973 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 PSMD8P48556 350 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 ZNF252P-AS1Q0IIN9 211 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 SEMA3BQ13214 749 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 Q6ZVU0 165 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 PYROXD2Q8N2H3 581 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 ATP11CQ8NB49 1132 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 OR8D1Q8WZ84 308 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNIP1-203ENST00000493916 ACE2Q9BYF1 805 aaPredicted RBP23.16■■□□□ 1.3
SNIP1-203ENST00000493916 C6orf106Q9H6K1 298 aaPredicted RBP23.16■■□□□ 1.3
SNIP1-203ENST00000493916 ATP13A1Q9HD20 1204 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 MRPL47Q9HD33 250 aaKnown RBP23.16■■□□□ 1.3
SNIP1-203ENST00000493916 SERGEFQ9UGK8 458 aa23.16■■□□□ 1.3
SNIP1-203ENST00000493916 A0A1W2PP55 124 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 GNSP15586 552 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 GLDCP23378 1020 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 SLC20A2Q08357 652 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 IL31Q6EBC2 164 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 RETSATQ6NUM9 610 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 AADATQ8N5Z0 425 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 RNF214Q8ND24 703 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 GANCQ8TET4 914 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 EPAS1Q99814 870 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 SPON2Q9BUD6 331 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 TRIM7Q9C029 511 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 TMEM9BQ9NQ34 198 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 NDFIP2Q9NV92 336 aa23.15■■□□□ 1.3
SNIP1-203ENST00000493916 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.15■■□□□ 1.3
SNIP1-203ENST00000493916 CBX4O00257 560 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 CDX4O14627 284 aaPredicted RBP23.14■■□□□ 1.29
SNIP1-203ENST00000493916 MCF2LO15068 1137 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 RNASEH2AO75792 299 aaKnown RBP23.14■■□□□ 1.29
SNIP1-203ENST00000493916 IL1BP01584 269 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 GOT1P17174 413 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 ENGP17813 658 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 MAOBP27338 520 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 HTR7P34969 479 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 SERPINH1P50454 418 aaKnown RBP23.14■■□□□ 1.29
SNIP1-203ENST00000493916 GFPT1Q06210 699 aaPredicted RBP23.14■■□□□ 1.29
SNIP1-203ENST00000493916 LINGO4Q6UY18 593 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 ARFGAP1Q8N6T3 406 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 RTL3Q8N8U3 475 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms