RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 ZNF793Q6ZN11 406 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 PAF1Q8N7H5 531 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 SCAIQ8N9R8 606 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMG7-208ENST00000493609 NRIP3Q9NQ35 241 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 PAPOLBQ9NRJ5 636 aaKnown RBP6.35□□□□□ -1.39
SMG7-208ENST00000493609 SLC13A4Q9UKG4 626 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 SUFUQ9UMX1 484 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 WIZO95785 1651 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 NCAPD3P42695 1498 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 ATAD2BQ9ULI0 1458 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 HLA-DQA2P01906 255 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 PTPN9P43378 593 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 ABCG1P45844 678 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 CYP2J2P51589 502 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 VAMP2P63027 116 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 TBL3Q12788 808 aaKnown RBP6.34□□□□□ -1.39
SMG7-208ENST00000493609 EZH2Q15910 746 aaKnown RBP6.34□□□□□ -1.39
SMG7-208ENST00000493609 NFIL3Q16649 462 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 FAM171A1Q5VUB5 890 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 JAKMIP3Q5VZ66 844 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 CCDC25Q86WR0 208 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 LSM14AQ8ND56 463 aaKnown RBP6.34□□□□□ -1.39
SMG7-208ENST00000493609 PRSS3P2Q8NHM4 247 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 NCSTNQ92542 709 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 EME1Q96AY2 570 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 CLSTN3Q9BQT9 956 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 WDR26Q9H7D7 661 aa6.34□□□□□ -1.39
SMG7-208ENST00000493609 TRBV5-3A0A0A0MS03 114 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 A6NLC8 198 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 F8W810 466 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 TLR2O60603 784 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 CBX6O95503 412 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 GJC1P36383 396 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 LIFRP42702 1097 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 PMPCAQ10713 525 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 PLK5Q496M5 336 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 C5orf22Q49AR2 442 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 FBXO43Q4G163 708 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 SLC9C2Q5TAH2 1124 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 B4GALNT4Q76KP1 1039 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 DDIASQ8IXT1 998 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 ZBTB10Q96DT7 871 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 ZNF419Q96HQ0 510 aaPredicted RBP6.33□□□□□ -1.4
SMG7-208ENST00000493609 TUBB6Q9BUF5 446 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMG7-208ENST00000493609 LMAN2LQ9H0V9 348 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 TTC12Q9H892 705 aaPredicted RBP6.33□□□□□ -1.4
SMG7-208ENST00000493609 ALKBH4Q9NXW9 302 aa6.33□□□□□ -1.4
SMG7-208ENST00000493609 AGO2Q9UKV8 859 aaKnown RBP6.33□□□□□ -1.4
SMG7-208ENST00000493609 KIR2DS5A0A0G2JLQ3 304 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 A0A1W2PPC1 479 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 TARSL2A2RTX5 802 aaKnown RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 FOXO6A8MYZ6 492 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 KIR2DS3K7RE56 304 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 STRNO43815 780 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 IFIT1P09914 478 aaKnown RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 PSMC2P35998 433 aaKnown RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 SSBP2P81877 361 aaPredicted RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 G3BP1Q13283 466 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMG7-208ENST00000493609 NAA25Q14CX7 972 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 COLEC12Q5KU26 742 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 INTS11Q5TA45 600 aaKnown RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 VWA5B1Q5TIE3 1220 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 AADACL2Q6P093 401 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 GJB7Q6PEY0 223 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 DEF8Q6ZN54 512 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 LRRC8DQ7L1W4 858 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 ANKRD13BQ86YJ7 626 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 SETD9Q8NE22 299 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 RUFY2Q8WXA3 655 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 RRP36Q96EU6 259 aaKnown RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 SEC62Q99442 399 aaKnown RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 NPLQ9BXD5 320 aaPredicted RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 TTYH1Q9H313 450 aaPredicted RBP6.32□□□□□ -1.4
SMG7-208ENST00000493609 HIPK3Q9H422 1215 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 UBN1Q9NPG3 1134 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 ICKQ9UPZ9 632 aa6.32□□□□□ -1.4
SMG7-208ENST00000493609 TTBK1Q5TCY1 1321 aaPredicted RBP6.31□□□□□ -1.4
SMG7-208ENST00000493609 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 PRPF4O43172 522 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMG7-208ENST00000493609 ATP1A3P13637 1013 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 FBLP22087 321 aaKnown RBP6.31□□□□□ -1.4
SMG7-208ENST00000493609 MRPS21P82921 87 aaKnown RBP6.31□□□□□ -1.4
SMG7-208ENST00000493609 GALNT2Q10471 571 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 SMTNL2Q2TAL5 461 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 ENTPD8Q5MY95 495 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 C10orf25Q5T742 122 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 ISM2Q6H9L7 571 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 HMBOX1Q6NT76 420 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 ADGRG6Q86SQ4 1221 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.31□□□□□ -1.42e-6■■□□□ 12.3
SMG7-208ENST00000493609 NAXEQ8NCW5 288 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 ELP4Q96EB1 424 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 CD180Q99467 661 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 IFT27Q9BW83 186 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 SPAG4Q9NPE6 437 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 THSD1Q9NS62 852 aa6.31□□□□□ -1.4
SMG7-208ENST00000493609 TRNAU1APQ9NX07 287 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms